DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5281 and Slc35a4

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_671481.2 Gene:Slc35a4 / 257647 RGDID:628792 Length:324 Species:Rattus norvegicus


Alignment Length:342 Identity:68/342 - (19%)
Similarity:119/342 - (34%) Gaps:93/342 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QEGAPPPDPAP---RWLERL---QRRLGADCPYL---------------GILLATLSSLFFSLCS 54
            ::|..|....|   ||...|   ....||..|:|               .:||..|:.|.....|
  Rat     4 EDGGMPGLARPKQARWTLMLFLSTAMYGAHAPFLALCHVDGRVPFRPSSAVLLTELTKLLLCAFS 68

  Fly    55 VIV------KGLVDVNP--MELASFRFVGVLLPA-LPILIYTRQPVFPEGKRVILLLRCFMGTTG 110
            ::|      :|    .|  .:.|.|....:|..| ..::||.::.:.|...:|:..|:  :|:|.
  Rat    69 LLVGWQTWPQG----TPPWRQAAPFALSALLYGANNNLVIYLQRYMDPSTYQVLSNLK--IGSTA 127

  Fly   111 LMLSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLF---------NVLTINMTLLGVVL 166
            |:... ...|...|...:.:.......|.:|....:||....         ..:.:::|.||::|
  Rat   128 LLYCL-CLGHRLSARQGLALLLLMAAGACYASGGFQEPGNTLPGPRSAAGARPMPLHITPLGLLL 191

  Fly   167 I--------------------TRPP--------FVFGDTAESEDVAGKTYDIWGPVAAISSTLFG 203
            :                    .|.|        :.||........||.     ||.........|
  Rat   192 LILYCLISGLSSVYTELIMKRQRLPLALQNLFLYTFGVILNLGLYAGS-----GPGPGFLEGFSG 251

  Fly   204 ANVYILL-RALKNLHFSVIMTNFGTIALVY----TLIVCASIGAVCWPSCGRDRWLVVVLGVFSF 263
            ..|.::| :|:..|..|.:|.:..:|..::    :|:|.|.:.||.         |.:.|....|
  Rat   252 WAVLVVLNQAVNGLLMSAVMKHGSSITRLFIVSCSLVVNAVLSAVL---------LQLQLTATFF 307

  Fly   264 LGQILLTLSLQIEQAGP 280
            |..:|:.|::.:....|
  Rat   308 LAALLIGLAVCLYYGSP 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 60/311 (19%)
Slc35a4NP_671481.2 Nuc_sug_transp <83..320 CDD:398009 49/253 (19%)

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