DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5281 and nstp-4

DIOPT Version :10

Sequence 1:NP_650076.1 Gene:CG5281 / 41375 FlyBaseID:FBgn0037902 Length:347 Species:Drosophila melanogaster
Sequence 2:NP_493723.3 Gene:nstp-4 / 173428 WormBaseID:WBGene00015404 Length:339 Species:Caenorhabditis elegans


Alignment Length:238 Identity:54/238 - (22%)
Similarity:90/238 - (37%) Gaps:51/238 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LSFYAFRHMPLADASVIIFSTPVFVAIFARAFLKEPCTLFNVLTINMTLLGVVLITRPPFVFGD- 176
            |.|:|.:.:..|...|......:..|||:...|.:....:|.:.:.:...||.|:..|.   || 
 Worm   109 LLFFALKKLDAATYQVTYQLKILTTAIFSVTMLGKSLHRYNWMALILLTAGVALVQYPS---GDS 170

  Fly   177 -----TAESEDVAGKTYDIWGPVAAISSTLFGANVY-----------ILLRALKNLHFSVIMTNF 225
                 ||...|.:.....:...:||..|:.| |.||           :.:|.::...|||    |
 Worm   171 TTSKSTAAEHDASDNILGLGAVLAACFSSGF-AGVYFEKILKTSKVSLWIRNIQLAFFSV----F 230

  Fly   226 GTIALVYTLIVCASIGAVCWPSCGRDR---------WLVVVLGVFSFLGQILLTLSLQIEQAGPV 281
            |      .|:||   ....|.:...|.         |:||:|..:..     |.::|.::.|..:
 Worm   231 G------ALLVC---WLYDWQAISDDGFLRGYNGVIWIVVLLQAYGG-----LVIALVVKYADNI 281

  Fly   282 --AIARCADIVFAFVWQMLFFGE-TPTAYSLVGAVMVMGSVVL 321
              ..|....|:.:.....|..|: |.|....:||.:|:.:..|
 Worm   282 LKGFAVSLSIILSSFTSWLVLGDLTITTTFAIGATVVIFATFL 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5281NP_650076.1 RhaT 36..326 CDD:440461 54/238 (23%)
nstp-4NP_493723.3 Nuc_sug_transp 7..326 CDD:398009 54/238 (23%)

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