DRSC/TRiP Functional Genomics Resources

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Protein Alignment Exd2 and AT3G12420

DIOPT Version :10

Sequence 1:NP_650075.1 Gene:Exd2 / 41374 FlyBaseID:FBgn0037901 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_187848.2 Gene:AT3G12420 / 820421 AraportID:AT3G12420 Length:185 Species:Arabidopsis thaliana


Alignment Length:140 Identity:33/140 - (23%)
Similarity:48/140 - (34%) Gaps:43/140 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 TQWVLNELKNHCQTF----KVLGFDCEWI-TVGGSRRPVALLQLSSHR----------------- 105
            :||:.....|:|:.:    .|:|...:|. .|.....|......|.|.                 
plant    38 SQWIHEVEYNNCRPYYLQPLVVGVGVQWTPPVSYDANPPPDRYYSDHHPPRSYDPNPPPNRYYSD 102

  Fly   106 ----------------GLCALFRLCHMKQIPQDLRELLEDDSVIKVGVAPQEDAMKLS---HDYG 151
                            ..|.:.:|||..|:|..||..|.|.:...|||...:||.||:   |...
plant   103 HHPPHPPADTLQLCVGNQCLIIQLCHCDQVPTSLRSFLTDPNTTFVGVWNSQDAGKLARSKHQLE 167

  Fly   152 VGVASTLDLR 161
            :|  ..||:|
plant   168 IG--KLLDIR 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Exd2NP_650075.1 WRN_exo 62..226 CDD:176653 33/140 (24%)
AT3G12420NP_187848.2 DnaQ_like_exo 105..>185 CDD:447876 22/73 (30%)

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