DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Exd2 and exd2

DIOPT Version :10

Sequence 1:NP_650075.1 Gene:Exd2 / 41374 FlyBaseID:FBgn0037901 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001107878.1 Gene:exd2 / 334455 ZFINID:ZDB-GENE-030131-6387 Length:617 Species:Danio rerio


Alignment Length:530 Identity:215/530 - (40%)
Similarity:305/530 - (57%) Gaps:35/530 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VINSVQDPTTQWVLNELKNHCQTFKVLGFDCEW-----ITVGGSRRPVALLQLSSHRGLCALFRL 113
            ||:|.||....|  ..|:.....:.|||.||||     ::|.|....|:||||||..|.|.|.||
Zfish    82 VISSPQDWDNLW--PALQKDLSMYPVLGLDCEWVKRVRVSVKGRVSAVSLLQLSSFTGRCVLVRL 144

  Fly   114 CHMK--QIPQDLRELLEDDSVIKVGVAPQEDAMKLSHDYGVGVASTLDLRFLCVMAGHK---PEG 173
            ...:  |:|:.|..||.|..|:||||...||..:|:.|:|:.::.|:|||:|.:....:   ..|
Zfish   145 LAFQNAQLPKSLIVLLRDQRVLKVGVGCYEDGKRLAQDHGLTLSCTVDLRYLALRRSKQAVLTNG 209

  Fly   174 LG--KLSKTHLNYTLDKHWRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKLCRDLQPKHFWQR 236
            |.  .|::..||.||||...|.||:|||:.|.|:|:.|||.||.:::|::..|......:|....
Zfish   210 LSLKSLAEDLLNVTLDKSVELRCSDWEAEELSPEQITYAARDAQISIALFFHLLGMNTERHLPAE 274

  Fly   237 RQLDDNSMHNKFEPFLDVDFTKGFTLNPSGSGV--TRSKGST---QSKSNKWVP-----KKQP-- 289
            .:.....:....:..:||.| :|........|.  .||:.||   ....::.||     |::|  
Zfish   275 GEAVFLHLSACCQGLVDVPF-RGRCGGDGDEGERRRRSRKSTVDSPESGDQQVPDPRRNKRKPLG 338

  Fly   290 --YRQIATRTKDFYDNCLLQAPDGELLCTIDRRKASWYLNQNLGTHISEEPFTVRLNFEPAGRAV 352
              |   :.|....||||.|.||||:.|||.|::||.|||.:.:|..:||:||.|||.|||:||..
Zfish   339 VGY---SARKSPLYDNCFLHAPDGQPLCTCDKKKAKWYLEKGIGELVSEDPFIVRLLFEPSGRPD 400

  Fly   353 GDVGRFYQTIKKNQCVVCGDRDAYIRKNVVPREYRKHFPLVMKSHTSDDVLLLCPTCHQLSNISD 417
            .:.. :|.|.|:|.|||||..|:|||||:||.|||:|||..||.|.|.|:||||..||..||:.|
Zfish   401 SEKD-YYLTAKENLCVVCGKVDSYIRKNIVPHEYRRHFPSEMKDHNSHDILLLCTACHAASNVHD 464

  Fly   418 LRVRSKLAVQCEAPFKQEDGSVKYHDDPQLKRVQSAGKALLHHGAKIPAAKKAEMEKTLLDYYSD 482
            ..::::||.:..||...|:| |:..:|...:||:||.:|||.....:|.|:|.|:...:...:.:
Zfish   465 GALKAELAEEHAAPQGCEEG-VRLLEDADRRRVRSAARALLSAIDGMPTARKEELLSVIQSCFCN 528

  Fly   483 QTDITEDLLRQAASVEYRVENSDYCQHGERVVQQYRDH-FGGLVELERLWRQHFLHTMQPRFLPE 546
            ...:|:::|:.||::|.|:.|.:|..||.:|||.|.:. ..||:|||..||||||.:||||.||.
Zfish   529 GQQVTQEVLQDAAALETRISNENYVPHGLKVVQAYAEQGLRGLMELECRWRQHFLTSMQPRHLPP 593

  Fly   547 LWNVNHNADR 556
            ||.||||.|:
Zfish   594 LWCVNHNHDK 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Exd2NP_650075.1 WRN_exo 62..226 CDD:176653 69/175 (39%)
exd2NP_001107878.1 WRN_exo 83..263 CDD:176653 72/181 (40%)

Return to query results.
Submit another query.