DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL24-like and Rpl24

DIOPT Version :9

Sequence 1:NP_650073.1 Gene:RpL24-like / 41372 FlyBaseID:FBgn0037899 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_077180.1 Gene:Rpl24 / 68193 MGIID:1915443 Length:157 Species:Mus musculus


Alignment Length:170 Identity:47/170 - (27%)
Similarity:82/170 - (48%) Gaps:33/170 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAGKELAI 65
            |:::.|.|...|||||||.::.|.|.|||:|...||..||..|:|||::.||..||:...|    
Mouse     1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHKK---- 61

  Fly    66 DPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIKEKRTSHFVMERLRKGRQVEIQMDVKDVQRN 130
            ..|.|.:|:|.                 :|..:.:...|...:.:.:.|..|   :.:|:..||.
Mouse    62 GQSEEIQKKRT-----------------RRAVKFQRAITGASLADIMAKRNQ---KPEVRKAQRE 106

  Fly   131 MSLIRSPAAGLKQRRAQEAAEEAALM-----EEDLPEEKI 165
            .::    .|..:.::|::|:::.|:.     .:..|::||
Mouse   107 QAI----RAAKEAKKAKQASKKTAMAAAKAPTKAAPKQKI 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL24-likeNP_650073.1 Ribosomal_L24e 2..64 CDD:279571 28/61 (46%)
Rpl24NP_077180.1 Ribosomal_L24e 2..64 CDD:395998 28/65 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 106..157 7/41 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2075
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1502432at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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