DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL24-like and Rsl24d1

DIOPT Version :9

Sequence 1:NP_650073.1 Gene:RpL24-like / 41372 FlyBaseID:FBgn0037899 Length:191 Species:Drosophila melanogaster
Sequence 2:NP_001014234.2 Gene:Rsl24d1 / 363099 RGDID:1309784 Length:163 Species:Rattus norvegicus


Alignment Length:163 Identity:94/163 - (57%)
Similarity:127/163 - (77%) Gaps:6/163 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAGKELAI 65
            |||:.|||||..||||||:.|||||||||:||:.||||.||:|:|||||.||||:||||||||.:
  Rat     1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAGKELTV 65

  Fly    66 DPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIKEKRTSHFVMERLRKGRQVEIQMDVKDVQRN 130
            |.|||||||||.|:||.||.|.|.::|:|||.|||:||.:.|:|.||:|.::::...|:::|::|
  Rat    66 DNSFEFEKRRNEPVKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQKVQDIREVKQN 130

  Fly   131 MSLIRSPAAG----LKQRRAQEAAEEAALMEED 159
            :.|||:|.||    |:::..|:..|:..:  ||
  Rat   131 IHLIRAPLAGKGKQLEEKMVQQLQEDVDM--ED 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL24-likeNP_650073.1 Ribosomal_L24e 2..64 CDD:279571 47/61 (77%)
Rsl24d1NP_001014234.2 Ribosomal_L24e 2..64 CDD:395998 47/61 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353163
Domainoid 1 1.000 118 1.000 Domainoid score I5756
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9462
Inparanoid 1 1.050 207 1.000 Inparanoid score I3634
OMA 1 1.010 - - QHG54151
OrthoDB 1 1.010 - - D1502432at2759
OrthoFinder 1 1.000 - - FOG0004335
OrthoInspector 1 1.000 - - oto96148
orthoMCL 1 0.900 - - OOG6_101340
Panther 1 1.100 - - LDO PTHR10792
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3656
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

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