DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaG and betA

DIOPT Version :10

Sequence 1:NP_650070.1 Gene:ninaG / 41369 FlyBaseID:FBgn0037896 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_414845.1 Gene:betA / 945716 ECOCYCID:EG10109 Length:556 Species:Escherichia coli


Alignment Length:592 Identity:171/592 - (28%)
Similarity:260/592 - (43%) Gaps:107/592 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FDYVIVGGGTGGSTLTSLLAKNSNGSVLLIEAGG---QFGLLSRIPLLTTFQQKGIN-DWSFLSV 107
            |||:|:|.|:.|:.|.:.|.::.|.||||:||||   :|...:::|....|..:|.. :|::.:.
E. coli     3 FDYIIIGAGSAGNVLATRLTEDPNTSVLLLEAGGPDYRFDFRTQMPAALAFPLQGKRYNWAYETE 67

  Fly   108 PQKHSSRGLIERRQCLPRGKGLGGSANLNYMLHFDGHGPDFDSWRDHHNLSDWSWAQMRSFMAAA 172
            |:...:.   .|.:| .||||||||:.:|.|.:..|:..|.|:|.....|.:||:.....:...|
E. coli    68 PEPFMNN---RRMEC-GRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYLDCLPYYRKA 128

  Fly   173 KPKNPDMLE---------IPRRYSK-----LTEALEEAQAQFAYKDWIFRRSLYN---------- 213
            :.:  ||.|         :....||     |.||:.||..|..|.    |....|          
E. coli   129 ETR--DMGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYP----RTDDLNGYQQEGFGPM 187

  Fly   214 ----IRNGLRHSVVQQFLNPVIHHSNLRLLPDALVKRIQLAPSPFLQATSILVGIKDEENREKEF 274
                ...|.|.|..:.:|:......||.:...|:...|       :......||:   |..|.:.
E. coli   188 DRTVTPQGRRASTARGYLDQAKSRPNLTIRTHAMTDHI-------IFDGKRAVGV---EWLEGDS 242

  Fly   275 SIEVR----RELILCAGAYQTPQLLMASGIGDVSALKKLGIPAQHSLPLVGHNLHDHFNLPLFVS 335
            :|..|    :|::|||||..:||:|..||:|:...|.:..||..|.||.||.||.||..:.|   
E. coli   243 TIPTRATANKEVLLCAGAIASPQILQRSGVGNAELLAEFDIPLVHELPGVGENLQDHLEMYL--- 304

  Fly   336 MGVTGPTLNQNTLLNPMTLINYLSSGSGP-LGNFGVLGNVVSYGGLGAPPYGITFFGAGAIDESA 399
                     |.....|::|...|...:.| :|...:.|..    |:||..:    |.||..    
E. coli   305 ---------QYECKEPVSLYPALQWWNQPKIGAEWLFGGT----GVGASNH----FEAGGF---- 348

  Fly   400 LMSISNFKGPAFRALF---PRYYNSS----QEGFVVISSCLQPKSRGSVGLLNRHMRRNPLIDPN 457
            :.|...|..|..:..|   ...||.|    :.||......::..|||.|.:.:|...::|.|..|
E. coli   349 IRSREEFAWPNIQYHFLPVAINYNGSNAVKEHGFQCHVGSMRSPSRGHVRIKSRDPHQHPAILFN 413

  Fly   458 YLSSEEDVACTISAIRSAVELVNSTAFAALHPRIHWPRVQECSNFGPFERDFFDNRPSDQYLECL 522
            |:|.|:|......|||...|:::..|......|...|.| ||.              :|:.|:..
E. coli   414 YMSHEQDWQEFRDAIRITREIMHQPALDQYRGREISPGV-ECQ--------------TDEQLDEF 463

  Fly   523 MRHVGLGSHHPGGTCALG----SVVDSQLRLKGVSNVRVVDASVLPRPISGNPNSVVVAIALRAA 583
            :|:....:.||.|||.:|    ||||.:.|:.|:..:||||||::|:.|:||.|:..:.|..:.|
E. coli   464 VRNHAETAFHPCGTCKMGYDEMSVVDGEGRVHGLEGLRVVDASIMPQIITGNLNATTIMIGEKIA 528

  Fly   584 SWILKSE 590
            ..|...|
E. coli   529 DMIRGQE 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaGNP_650070.1 BetA 66..593 CDD:441878 162/573 (28%)
betANP_414845.1 PRK02106 1..555 CDD:235000 171/592 (29%)

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