Protein Alignment ninaG and HTH

DIOPT Version :10

• Sequence 1: NP_650070.1
• Gene: ninaG / 41369
• FlyBaseID: FBgn0037896
• Length: 597
• Species: Drosophila melanogaster
• Sequence 2: NP_565050.1
• Gene: HTH / 843628
• AraportID: AT1G72970
• Length: 594
• Species: Arabidopsis thaliana
• Alignment Length: 602
• Identity: 148/602 - (24%)
• Similarity: 237/602 - (39%)
• Gaps: 123/602 - (20%)

  Fly    46 AFDYVIVGGGTGGSTLTSLLAKNSNGSVLLIEAGGQFGLLSRIPLLTTFQQKGINDWSFLSVPQK 110
            ::||:::||||.|..|.:.|::|.  |||::|.||.....:.:..|..| ..|:.|.|..|..|.
plant    62 SYDYIVIGGGTAGCPLAATLSQNF--SVLVLERGGVPFTNANVSFLRNF-HIGLADISASSASQA 123

  Fly   111 H-SSRGLIERRQCLPRGKGLGGSANLNYMLHFDGHGPDFDSWRDHHNLSDWSWAQMRSFMAAAKP 174
            . |:.|:...|   .|..|.|...|..:....|........|........:.|.:.
plant   124 FVSTDGVYNAR---ARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVER--------- 176

  Fly   175 KNPDMLEIPRRYSKLT---EALEEAQAQFAYKDWIFRRSLYN------------IRNGLRHSVVQ 224
               :::..|    |||   :||.::..:...:.  |....|:            .|.|.||:..:
plant   177 ---EIVHQP----KLTLWQKALRDSLLEVGVRP--FNGFTYDHVSGTKIGGTIFDRFGRRHTAAE 232

  Fly   225 --QFLNPVIHHSNLRLLPDALVKRIQLAPS---PFLQATSILVGIKDEENREKEFSIEVRR--EL 282
              .:.||    ..||:|..|.|::|....|   |  :.|.::  .|||:..:.:..:..|:  |:
plant   233 LLAYANP----QKLRVLIYATVQKIVFDTSGTRP--RVTGVI--FKDEKGNQHQALLSNRKGSEV 289

  Fly   283 ILCAGAYQTPQLLMASGIGDVSALKKLGIPAQHSLPLVGHNLHDHFNLPLFVSMGVTGPTLNQNT 347
            ||.:||..:||:||.||||....|::|.||.......||..:.|:   |:             ||
plant   290 ILSSGAIGSPQMLMLSGIGPKKELQRLKIPVVLENEHVGKGMADN---PM-------------NT 338

  Fly   348 LLNP------MTLINYLSSGSGPLGNFGVLGNVVSYGGLGAPPYGI-TFFGAGAIDESALMSISN 405
            :|.|      .:||..:.     :...||.  |.:..|.|..|..| |.:|        :||..|
plant   339 ILVPSKAPIEQSLIQTVG-----ITKMGVY--VEASTGFGQSPESIHTHYG--------IMSNKN 388

  Fly   406 ----------FKGPAFRALFPRYYNSSQEGF---VVISSCLQPKSRGSVGLLNRHMRRNPLIDPN 457
                      .:..|.:|...|......|.|   .::.....|.|||.:.|:|.::..||.:..|
plant   389 ELFSTIPAKQRRPEATQAYITRNKYQLHEAFNGSFILEKLAYPISRGHLSLVNTNVDDNPSVTFN 453

  Fly   458 YLSSEEDVACTISAIRSAVELVNSTAF--------AALHPRIHWPRVQECSNFGPFERDFFDNRP 514
            |.....|:...:.|||...::|.|..|        ..:|..:.. .|:...|..|  :...|.:.
plant   454 YFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDKQNVHKMLSL-SVKANINLRP--KQLNDTKS 515

  Fly   515 SDQYLECLMRHVGLGSHHPGGTCALGSVVDSQLRLKGVSNVRVVDASVLPRPISGNPNSVVVAIA 579
            ..|:  |....|.:..:|  |.|.:|.||....::.||..:||:|.|........||.:.::.:.
plant   516 MAQF--CKDTVVTIWHYH--GGCLVGKVVSPNRKVLGVDRLRVIDGSTFDESPGTNPQATMMMMG 576

  Fly   580 LRAASWILKSEL--QAG 594
            ......||:..|  :||
plant   577 RYMGVKILRERLGNKAG 593

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ninaG	NP_650070.1	BetA	66..593	CDD:441878	137/579 (24%)
HTH	NP_565050.1	PLN02785	18..594	CDD:215420	148/602 (25%)