DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaG and AT1G03990

DIOPT Version :10

Sequence 1:NP_650070.1 Gene:ninaG / 41369 FlyBaseID:FBgn0037896 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_171895.2 Gene:AT1G03990 / 839342 AraportID:AT1G03990 Length:758 Species:Arabidopsis thaliana


Alignment Length:623 Identity:112/623 - (17%)
Similarity:204/623 - (32%) Gaps:197/623 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DYVIVGGGTGGSTLTSLLAKNSNGSVLLIEAGGQFGLLSRIPLLTTFQQKGINDWSFLSVP---Q 109
            |.|:||.|.||....::||| |...|::||.|..|.     |          .|:|.|..|   :
plant   247 DAVVVGSGCGGGVAAAILAK-SGLRVVVIEKGNYFA-----P----------RDYSALEGPSMFE 295

  Fly   110 KHSSRGLI---ERRQCLPRGKGLGGSANLNYMLHFDGHGPDFDSWRDHHNLSDWSWAQMRSFMAA 171
            ...|..|:   :.|.....|..:||.:.:|:...........:.|..|..:|.:|..:.::.|..
plant   296 LFESNSLMMTHDGRFRFMAGSTVGGGSVVNWAASLKTPDAIIEEWSVHRGISIYSSEKYKAAMGI 360

  Fly   172 AKPKNPDMLEIPRRYSKLTEALEEAQAQFAYKDWIFRRSL------------------------Y 212
                      :.:|.....:.:.|     .:::.|.|:..                        |
plant   361 ----------VCKRLGVTEKIIRE-----GFQNQILRKGCEKLGLDVTIVPRNSTEKHYCGSCSY 410

  Fly   213 NIRNGLRHSVVQQFLNPVIHHSNLRLLPDALVKRIQLAPSPFLQATSILVGIKDEENREK----- 272
            ....|.:......:|...: ::|..:|.....:::.||.:.        ...::|..|.|     
plant   411 GCPTGEKRGTDSTWLVDAV-NNNAVILTQCKAEKLILADND--------ANKREESGRRKRCLGV 466

  Fly   273 --EFSIEVRREL-------ILCAGAYQTPQLLMASGIGDVSALKKLGIPAQHSLPLVGHNLHDHF 328
              ..|.:.|::|       |:..|:.:||.||.:||:.:.:               :...||.| 
plant   467 AASLSHQTRKKLQINAKVTIVACGSLKTPGLLASSGLKNSN---------------ISRGLHIH- 515

  Fly   329 NLPLFVSMGV-------------TGPTLNQNTLLNPMTL----INYLSSGSGPLGNFGVLGNVVS 376
              |:.::.|.             .|..:.....::||..    |...:...|| |.|..|...||
plant   516 --PIMMAWGYFPEKNSELEGAAHEGEIVTSLHYVHPMDSTTPNITLETPAIGP-GTFAALTPWVS 577

  Fly   377 YGGLGAPPYGITFFGAGAIDESALMSISNFKGPAFRALFPRYYNSSQEGFVVISSCLQPKSRGSV 441
                                           |...:....:|..::.     |.:.::.:..|.|
plant   578 -------------------------------GSDMKERMAKYARTAH-----IFAMVRDEGVGEV 606

  Fly   442 GLLNRHMRRNPLIDPNYLSSEEDVACTISAIRSAVELVNSTAFAALHPRIHWPRVQECSNFGPFE 506
                    :..::......::|: ..|| .::.|:.::.:...|.:.......:..:|.  |..:
plant   607 --------KGDIVKYRLTKADEE-NLTI-GLKQALRILVAAGAAEVGTYRSDGQRMKCD--GIKQ 659

  Fly   507 RD---FFD--NRPSDQYLECLMRHVGLGSH-------HPGGTCALGS-----VVDSQLRLKGVSN 554
            :|   |.|  |.|...        |.:..|       |..|.|.:|:     .:|.:.......:
plant   660 KDLEAFLDTVNAPPGV--------VSMSKHWTQSFTAHQIGCCRMGATEKEGAIDGKGESWEAED 716

  Fly   555 VRVVDASVLPRPISGNP----NSVVVAIALRAASWILK 588
            :.|.||||||..:..||    .|....|:.|.|..:.|
plant   717 LYVCDASVLPTALGVNPMITVQSTAYCISNRIAELMKK 754

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaGNP_650070.1 BetA 66..593 CDD:441878 104/605 (17%)
AT1G03990NP_171895.2 GMC_oxred_N 293..517 CDD:366272 40/265 (15%)
GMC_oxred_C 611..744 CDD:398739 29/144 (20%)

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