DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaG and AT4G28570

DIOPT Version :10

Sequence 1:NP_650070.1 Gene:ninaG / 41369 FlyBaseID:FBgn0037896 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_194586.1 Gene:AT4G28570 / 828975 AraportID:AT4G28570 Length:748 Species:Arabidopsis thaliana


Alignment Length:610 Identity:119/610 - (19%)
Similarity:205/610 - (33%) Gaps:175/610 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 DYVIVGGGTGGSTLTSLLAKNSNGSVLLIEAGGQFGLLSRIPLLTTFQQKGINDWSFLSVPQKHS 112
            |.|:||.|:||....:.||| :...||::|.|..|         |.....|:...|.|.:.:|..
plant   239 DAVVVGSGSGGGVAAANLAK-AGLKVLVLEKGNYF---------TAHDYSGLEVPSMLELYEKGG 293

  Fly   113 SRGLIERRQCLPRGKGLGGSANLNYMLHFDGHGPDFDSWRDHHNLSDWSWAQMRSFMAAAKPKNP 177
            ....::.:..|..|..:||...:|:....  ..||       |.|.:||......|..:.:.::.
plant   294 LLTTVDGKFMLLAGSAVGGGTAVNWSASI--RTPD-------HVLQEWSEGSKIKFFGSQEYQSA 349

  Fly   178 DMLEIPRRYSKLTEALEEAQAQFAYKDWIFRRSL------------------------YNIRNGL 218
             |.|:..|.     .:.|...:..:::.:.|:..                        |..|.|.
plant   350 -MDEVTIRI-----GVTERCVKHGFQNQVLRKGCERLGLQVESVPRNSPEDHYCGLCGYGCRAGA 408

  Fly   219 RHSVVQQFLNPVIHHSNLRLLPDALVKRIQLAPSPFLQATSILVGIKDE----------ENREKE 273
            ::...|.:|...:.:..:                       ||.|||.|          .|..|:
plant   409 KNGTDQTWLVDAVENGAV-----------------------ILTGIKAERFVLVDNTSSSNERKK 450

  Fly   274 FSIEVRRELILCAGAYQTPQLLMASGIGDVSALKKLGIPAQHSLPLVGHNLHDHFNLPLFVSMGV 338
                      .|.|.:       ||.:|.... ||..|.|:.::...|..|    ..||.:|.|:
plant   451 ----------RCVGVF-------ASSVGGKIG-KKFIIEARVTVSSAGSLL----TPPLMLSSGL 493

  Fly   339 TGPTLNQNTLLNPMTLI-NYL----SSGSGPLGNFGVLGNVVSYGGLGAPPYGITFFGAGAIDES 398
            ..|.:.:|..|:|:.:. .|.    |..||.:...|::.:|.....        |..|..||.|:
plant   494 KNPNIGRNLKLHPVLMTWGYFPEKDSEFSGKMYEGGIITSVHHMND--------TESGCKAILEN 550

  Fly   399 ALMSISNF-------KGPAFRALFPRYYNSSQEGFVVISSCLQPKSRGSVGLLNRHMRRNPLIDP 456
            .|:..:::       .||..:....:|..::.     :.:.::....|.|.:.|....|....|.
plant   551 PLIGPASYAGLSPWVSGPDLKERMIKYGRTAH-----LFALVRDLGSGEVMMENEVTYRTTKKDR 610

  Fly   457 NYLSSEEDVACTISAIRSAVELVNSTAFAALHPRIHWPRVQECSNFGPFERD-------FFDNRP 514
            ..|.:....|..:|....|||:                        |.:..|       ......
plant   611 ENLRAGLRQALRVSVAAGAVEV------------------------GTYRSDGQKMKCEAITKEA 651

  Fly   515 SDQYLECLMRHVGLG----------SHHPGGTCALG-SVVDSQLRLKGVS----NVRVVDASVLP 564
            .:::|:.:....|:|          |.|..|:|.:| :..:..|...|.|    .:.|.|.|:||
plant   652 MEEFLDEVDAVGGVGTKGEYWTTYFSAHQMGSCRMGVTAEEGALDENGESWEAEGLFVCDGSILP 716

  Fly   565 RPISGNPNSVVVAIALRAASWILKS 589
            ..:..||...:.:.|...:|.|:.|
plant   717 SAVGVNPMITIQSTAYCISSKIVDS 741

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaGNP_650070.1 BetA 66..593 CDD:441878 111/592 (19%)
AT4G28570NP_194586.1 GMC_oxred_N 285..507 CDD:366272 50/281 (18%)
BetA <371..732 CDD:441878 79/442 (18%)

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