DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaG and AT3G56060

DIOPT Version :10

Sequence 1:NP_650070.1 Gene:ninaG / 41369 FlyBaseID:FBgn0037896 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_567032.1 Gene:AT3G56060 / 824772 AraportID:AT3G56060 Length:577 Species:Arabidopsis thaliana


Alignment Length:616 Identity:139/616 - (22%)
Similarity:244/616 - (39%) Gaps:148/616 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LAPVERHFAFDYVIVGGGTGGSTLTSLLAKNSNGSVLLIEAG------------GQFG--LLSRI 88
            |||...|  |||:|:||||.|..|.:.|::|:  :||::|.|            |.|.  ||:..
plant    39 LAPKLSH--FDYIIIGGGTAGCALAATLSQNA--TVLVLERGGSPYDDPAATDIGNFANTLLNIT 99

  Fly    89 PLLTTFQQKGINDWSFLSVPQKHSSRGLIERRQCLPRGKGLGGSANLNYMLHFDGHGPDF---DS 150
            |          |.||.|.:    |..|:..     .|.:.|||...:|...:.... .||   ..
plant   100 P----------NSWSQLFI----SEDGVFN-----SRARVLGGGTVINAGFYSRAE-EDFVAEAG 144

  Fly   151 WRDHHNLSDWSWAQMRSFMAAAKPKNPDMLEIPRRYSKLTEALEEAQAQ----FAYKDWI---FR 208
            |......:.:.|.:.:  :....|.|       :..|...:.|.||...    |.|:..:   |.
plant   145 WERDEVEAAYEWVEKK--VVFEPPVN-------KWQSAFRDGLLEAGVTPYNGFTYEHIVGTKFG 200

  Fly   209 RSLYNIRNGLRHSVVQQFLNPVIHHSNLRLLPDALVKRIQLAPSPFLQAT--SILVGIKDEENRE 271
            .:::: |:|.||:...     ::.::|    |:.:|        .:|.|:  .||..||..: |.
plant   201 GTIFD-RDGHRHTAAN-----LLEYAN----PNMIV--------VYLHASVHKILFTIKGNQ-RP 246

  Fly   272 KEFSI------------------EVRRELILCAGAYQTPQLLMASGIGDVSALKKLGI-PAQHSL 317
            |.:.:                  ....|:||.|||..:|||||.||:|..:.|....: |.....
plant   247 KAYGVIFLDANGVSYKAELATQDSTMSEVILSAGAIASPQLLMLSGVGPAAHLAAYRVNPVIVDQ 311

  Fly   318 PLVGHNLHDHFNLPLFVSMGVTGPTLNQNTLLNPMTLINYLSSGSGPLGNFGVLGNVVSYGGLGA 382
            |:||..:.|:...|:|    :..|...:.:|:..:.:..:              |:.:..|...:
plant   312 PMVGQGMGDNPMNPVF----IPSPEPVEVSLVQAVGITKF--------------GSYIEGGSALS 358

  Fly   383 PPYGIT--FFGAGAID-----ESALMSISNFKGPAFRALFPRYYNSSQEGFVVISSCLQPKSRGS 440
            ....:|  ||. |.::     :....|||.|    |::| ....|.:.:..|:|.....|.|||.
plant   359 LSISLTRSFFD-GVLNLLKKTKLPTQSISKF----FKSL-DLTLNVTTKAGVIIQKVNGPLSRGH 417

  Fly   441 VGLLNRHMRRNPLIDPNYLSSEEDVACTISAIRSAVELVNSTAFAALHPRIHWPRVQE------- 498
            :.|.|.:...||.:..||....||:...:..:.:.:::::|..::    :..:|....       
plant   418 LELRNTNPDDNPSVTFNYFKDPEDLNKCVEGLSTIIKVIDSKGYS----KYKYPLASARGLLNLI 478

  Fly   499 ---CSNFGPFERDFFDNRPSDQYLECLMRHVGLGSHHPGGTCALGSVVDSQLRLKGVSNVRVVDA 560
               .:|..|  |........:||  |:...:.:..:|  |.|.:|.|||:..::.||..:|::|.
plant   479 LALPTNLRP--RHITSTFDLEQY--CIDTVMTIYHYH--GGCQVGKVVDNNYKVLGVDALRIIDG 537

  Fly   561 SVLPRPISGNPNSVVVAIALRAASWILKSEL 591
            |...:....||.:.::.:.......||:..:
plant   538 STFLKSPGTNPQATIMMLGRYMGQKILRERM 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaGNP_650070.1 BetA 66..593 CDD:441878 124/588 (21%)
AT3G56060NP_567032.1 PLN02785 5..568 CDD:215420 139/614 (23%)

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