DRSC/TRiP Functional Genomics Resources

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Protein Alignment ninaG and CG12539

DIOPT Version :9

Sequence 1:NP_650070.1 Gene:ninaG / 41369 FlyBaseID:FBgn0037896 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_572976.1 Gene:CG12539 / 32412 FlyBaseID:FBgn0030586 Length:626 Species:Drosophila melanogaster


Alignment Length:639 Identity:178/639 - (27%)
Similarity:293/639 - (45%) Gaps:94/639 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILVLAGIVIGFLSIIVV-------LAGTLLKNSVPNVLAPVERHFAFDYVIVGGGTGGSTLTSLL 65
            :|:...:..|.::.:|:       |...:.:.:.|||...:..   :|::::|.|..|.||.:.|
  Fly    15 LLIFTTVARGDVNRLVLDQLNQVGLVNLIEQATRPNVPRDLSN---YDFIVIGAGAAGCTLAARL 76

  Fly    66 AKNSNGSVLLIEAGGQFGLLSRIPLLTTFQQKGINDWSFLSVPQKHSSRGLIERRQCLPRGKGLG 130
            ::|...||.||||||...:....|::..:.|:..::|.:.|||||.|..|:......|||||.||
  Fly    77 SENPQVSVALIEAGGVENIAHLTPVVAGYLQQTSSNWGYKSVPQKLSCHGMNNNECALPRGKILG 141

  Fly   131 GSANLNYMLHFDGHGPDFDSWRDHHNLSDWSWAQMRSFMAAAK--------------PKNPDMLE 181
            |::::|||::..|:..|||:|....| ..||:.::..:...::              ...|..:|
  Fly   142 GTSSINYMIYNRGNRRDFDAWAAAGN-PGWSYDEVLPYFLRSEHAQLQGLEQSPYHNHSGPLSVE 205

  Fly   182 IPRRYSKLTEALEEAQAQFAYKDWIFRRSLY-------------NIRNGLRHSVVQQFLNPVIH- 232
            ..|..|::.:|..||..:..     ..|:.|             |..||.|||....::.||.. 
  Fly   206 YVRFRSQMVDAFVEASVESG-----LPRTDYNGESQLGVSYVQANTLNGRRHSAYSAYIKPVRDL 265

  Fly   233 HSNLRLLPDALVKRIQLAPSPFLQATSILVGIKDEENREKEFSIEVRRELILCAGAYQTPQLLMA 297
            .|||::...:.|.||.:.     :||....|: :...:.|.::.:.|:|:||.||::.:|||||.
  Fly   266 RSNLQIFTFSQVTRILID-----EATKSAYGV-EFHYKNKAYTFKARKEVILSAGSFNSPQLLML 324

  Fly   298 SGIGDVSALKKLGIPAQHSLPLVGHNLHDHFNLPLFVSMGVTGPTLNQNTL--------LNPMTL 354
            ||||....|:.:|||...:|| ||..:.||        |...|||...||.        :.|..|
  Fly   325 SGIGPEDNLRGIGIPLIKALP-VGKRMFDH--------MCHFGPTFVTNTTGQTTFTSRVTPAEL 380

  Fly   355 INYLSSGSGPLGNFGVLGNVVSYGGLGAPPYG----------ITFFGAGAIDESALMSI-SNFKG 408
            |::|.:|: |......:|.|.:...|......          |...|:.|.||...:.: :|||.
  Fly   381 ISFLLAGN-PATRMSSIGGVEALAFLKTQRSNLPNDWPDIELIMVTGSLASDEGTGLKLGANFKD 444

  Fly   409 PAFRALFPRYYNSSQEGFVVISSCLQPKSRGSVGLLNRHMRRNPLIDPNYLSSEEDVACTISAIR 473
            ..:..::.....:.|:.|.::.....|||.|.:.|.:|:....|.|||.|..:||||...:..|:
  Fly   445 EIYDRMYRELAQAQQDHFTLLIMQFHPKSVGRLWLKDRNPLGWPKIDPKYFVAEEDVEYLLDGIK 509

  Fly   474 SAVELVNSTAFAALHPRIHWPRVQECSNFGPFERDFFDNRPSDQYLECLMRHVGLGSHHPGGTCA 538
            :::.::...|...:..|:....|..|..     ..|    .||.|..|.:|.:....||...||.
  Fly   510 ASLRIIEMPAMQRIGARLLKRTVPGCEG-----HQF----ASDDYWRCSIRTLSYTLHHQVATCR 565

  Fly   539 LG------SVVDSQLRLKGVSNVRVVDASVLPRPISGNPNSVVVAIALRAASWI 586
            :|      :||:.||::.||..:||||.|::|.|.:.:.|:....|..:||..|
  Fly   566 MGAESDPTTVVNHQLKVHGVRKLRVVDTSIIPFPPTAHTNAAAFMIGEKAADMI 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ninaGNP_650070.1 BetA 72..588 CDD:225186 163/568 (29%)
NADB_Rossmann 119..327 CDD:304358 69/235 (29%)
GMC_oxred_C 435..582 CDD:282984 46/152 (30%)
CG12539NP_572976.1 PRK02106 58..620 CDD:235000 171/593 (29%)
NADB_Rossmann 59..>90 CDD:304358 13/30 (43%)
NADB_Rossmann 128..355 CDD:304358 71/247 (29%)
GMC_oxred_C 471..615 CDD:282984 46/152 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446453
Domainoid 1 1.000 69 1.000 Domainoid score I3423
eggNOG 1 0.900 - - E1_COG2303
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173099at33208
OrthoFinder 1 1.000 - - FOG0000165
OrthoInspector 1 1.000 - - otm47571
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11552
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X135
98.850

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