DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6723 and slc5a6b

DIOPT Version :9

Sequence 1:NP_650069.2 Gene:CG6723 / 41368 FlyBaseID:FBgn0037895 Length:587 Species:Drosophila melanogaster
Sequence 2:XP_005158632.1 Gene:slc5a6b / 796312 ZFINID:ZDB-GENE-050913-86 Length:603 Species:Danio rerio


Alignment Length:610 Identity:191/610 - (31%)
Similarity:315/610 - (51%) Gaps:72/610 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYVAFVSMFLLCIGIGIYFGFM-NKSVSEDDYMLGGRKMLVIPIAFSLVASFVSGITLLGLPTEV 81
            |||.|..:.:..:.||:|:.|. .:..:..::::..|.|..:|::.||:|:|.|.:.::|.|.||
Zfish    13 DYVIFGLLLVASMSIGLYYAFTGGRQSTTQEFLIADRSMKCLPLSLSLMATFQSAVAIIGTPAEV 77

  Fly    82 YSYGIQYLYVSCG-VIGMGVVMGVFYLPVFHDLNITSTYEYLEVRFDRRLRLYGSVMFAIMNVAY 145
            |::|.||.::.|. |:|:.:...:| :|:|:.|::||.|:|||:||.:.:|:.|:|.|....|.|
Zfish    78 YAHGTQYWFIGCSYVLGLLIPAHIF-IPLFYRLHLTSVYQYLELRFCKAVRICGTVTFIFQMVIY 141

  Fly   146 LPIVIYVPALAFNQVTGIGVHTITPIVCIICVFYTSLGGLKAVVWTDVVQAISMLGALCLVAIKG 210
            :.:.||.||||.|.|||..:........::|..||:||||||||||||.|.:.|......|.|.|
Zfish   142 MGVGIYTPALALNAVTGFHLWGAVLATGLVCTLYTALGGLKAVVWTDVFQTVVMFTGQLAVIIVG 206

  Fly   211 TRDIGGAGVVLERAW----SSDRLEAPDLSIDPTVRHTFWCLFFGGIVYWTQTNAVSQNMIQRYL 271
            ....||    |..||    ...|:...||:.|||||||||.|..||:........|:|..:||||
Zfish   207 VHQAGG----LSEAWGKVRDGGRISGIDLNPDPTVRHTFWTLAVGGVFLMLSLYGVNQAQVQRYL 267

  Fly   272 SLPSLGDA-RKALCIF-CVGVLILMALCGYNGLLIYATYQNCDPLTTKLAKARDQLLPLFVMKTL 334
            |..:..:| .....:| |:.:.:|:: | ..||:::|.|....|:..:...::||::..|||..|
Zfish   268 SSRTEREAVMSCYMVFPCLQLALLLS-C-LMGLVMFACYGQNSPVEQQYITSKDQMVLYFVMDML 330

  Fly   335 GELPGMTGLFIAGVFSAALSSLSTCLNSMSAVVLEDFVKPYVKKPLSSSAINWIMRLVVVGVGVL 399
            ...||:.|||:|.:|||:||::|:..||::.|.:.|.:||:..  ::.:....:.:|:.:..|::
Zfish   331 QNFPGLPGLFVACLFSASLSTISSAFNSLATVTMVDLIKPHYS--MTEARATLLSKLLALSYGII 393

  Fly   400 CVCLVYVVEHM-GTVLQLTMSLEAITNGPLFGIFTIGLFLPWINGNSALVGGVMGVIAMSWVSLN 463
            |:.:.|:|..| .:|||..:|:..:..|||.|:|.:|:|.|..|...|:.|...|::...||.: 
Zfish   394 CLAMAYLVHLMNSSVLQAALSIFGMIGGPLLGLFCLGIFFPCANSIGAVTGLSAGLLMAFWVGI- 457

  Fly   464 AQWAIASGAITYKTKPL------NVEQCDYSFNVTTSLANTTHLGASAED--IFPLYRISYMWYT 520
                  .|.:|....|:      .:...|.|.|:|   |.|..|.|.:..  :...|.:|||||:
Zfish   458 ------GGFLTRMPSPVIPLLNSTITVPDVSENIT---AATAELEADSRSAGLHGFYSLSYMWYS 513

  Fly   521 TFGASITIFVALLGTFVFGKNNPNKVDPV---LLTPCIRKFFAF--------------------- 561
            ...:...:.|.|:.:.:.|   |.|.|.|   .:.|.::...::                     
Zfish   514 ALSSCTVLIVGLIISCITG---PTKGDDVASGTVYPVVKTAQSYLKPSTCCKTTAEHKQVDGQKE 575

  Fly   562 ---------GSEKHMDAFRPDIPLQ 577
                     ||::....|.||:.|:
Zfish   576 MNGTVKEDAGSQEETQRFLPDVELE 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6723NP_650069.2 SLC5sbd_NIS-SMVT 17..537 CDD:271383 179/535 (33%)
slc5a6bXP_005158632.1 SLC5-6-like_sbd 9..532 CDD:294310 179/537 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D489472at33208
OrthoFinder 1 1.000 - - FOG0000151
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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