DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6723 and Slc5a10

DIOPT Version :9

Sequence 1:NP_650069.2 Gene:CG6723 / 41368 FlyBaseID:FBgn0037895 Length:587 Species:Drosophila melanogaster
Sequence 2:NP_001100477.1 Gene:Slc5a10 / 303205 RGDID:1305232 Length:596 Species:Rattus norvegicus


Alignment Length:581 Identity:132/581 - (22%)
Similarity:230/581 - (39%) Gaps:109/581 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYVAFVSMFLLCIGIGIYFGFMNKSVSEDDYMLGGRKMLVIPIAFSLVASFVSGITLLGLPTEVY 82
            |.:.....|.|.:.:|::........:...|.|.||.|...||..||.||.......:||.....
  Rat    20 DIIVISLYFALNVAVGVWTACRANKNTVSGYFLAGRDMAWWPIGASLFASSEGSGLFIGLAGSGA 84

  Fly    83 SYGIQYLYVSCGVIGMGVVMGVFYLPVFHDLNITSTYEYLEVRF-DRRLRLYGSVMFAIMNV-AY 145
            :.|:...........:.:.:...::|::....|.:..||::.|| .:|:|:|.||:..:::| ..
  Rat    85 AGGLAVAGFEWNATYVLLALAWVFVPIYVSSEIVTLPEYIQKRFGGQRIRMYLSVLSLLLSVFTK 149

  Fly   146 LPIVIYVPALAFNQVTGIGVHTITPIVCIICVFYTSLGGLKAVVWTDVVQ-AISMLGALCLVAIK 209
            :.|.:|..||..:...|...:..|.:...|...||..|||..|::||.:| ||.::||: ::|:|
  Rat   150 ISIDLYAGALFVHICLGWNFYLSTILTLAITALYTIAGGLATVIYTDALQTAIMVVGAV-ILAVK 213

  Fly   210 GTRDIGGAGVVLERAWSS--------------DRLEAPDLSIDPTVRHTFWC-LFFGGIV----Y 255
            ....|||. ..||.|::.              .|.:|..:..||:.....|. :.||..:    |
  Rat   214 AFNQIGGY-EQLEAAYAQATPSRTIPNTTCHLPRADAMHMFRDPSTGDLPWTGMTFGLTIMATWY 277

  Fly   256 WTQTNAVSQNMIQRYLSLPSLGDARKALCIFCVGVLILMALCGYNGLLIYATYQN---------- 310
            |    ...|.::||.||..:|..|:....:.....::.|.|....|::....:.:          
  Rat   278 W----CTDQVIVQRSLSARNLNHAKAGSILASYLKMLPMGLMIMPGMISRVLFPDDVGCVVPSEC 338

  Fly   311 ---------CDPLT-TKLAKARDQLLPLFVMKTLGELPGMTGLFIAGVFSAALSSLSTCLNSMSA 365
                     |..:. .||..   :|:|:          |:.||.||.:.:|.||||::..||.|.
  Rat   339 LRACGAEIGCSNIAYPKLVM---ELMPI----------GLRGLMIAVMMAALLSSLTSIFNSSST 390

  Fly   366 VVLEDFVKPYVKKPLSSSAINWIMRLVVVGVGVLCVCLVYVVEHMGTVLQLTMSLEAITNG---P 427
            :...|..:.: :.......:..:.|||:|.:..:.|..:.|::...:. ||.:.::::|:.   |
  Rat   391 LFTMDIWRQF-RPGAGERELLLVGRLVIVVLVGVSVAWIPVLQGSNSG-QLFIYMQSVTSSLAPP 453

  Fly   428 LFGIFTIGLFLPWINGNSALVGGVMGVIAMSWVSLNAQWAIASGAITYKTKPLNVEQCDYSFNVT 492
            :..||.:|:|  |...|..  |...|::|          .:..||:..               |.
  Rat   454 VTAIFLLGIF--WRRANEQ--GAFWGLMA----------GLLVGALRL---------------VL 489

  Fly   493 TSLANTTHLGASAEDIFPLYRISYMWYTTFGASITIFVALLGTFVFGKNNPNKVDPVLLTP 553
            ..|....|.|......|||..|.|:.:     :|.:|.........|.         ||:|
  Rat   490 EFLYPEPHCGQIDTRPFPLGSIHYLHF-----AIALFFLTCAVMAAGS---------LLSP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6723NP_650069.2 SLC5sbd_NIS-SMVT 17..537 CDD:271383 128/563 (23%)
Slc5a10NP_001100477.1 SLC5-6-like_sbd 17..596 CDD:294310 132/581 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340282
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.