DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ranbp9 and ipo11

DIOPT Version :9

Sequence 1:NP_001287284.1 Gene:Ranbp9 / 41367 FlyBaseID:FBgn0037894 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_001039123.1 Gene:ipo11 / 733946 XenbaseID:XB-GENE-494941 Length:975 Species:Xenopus tropicalis


Alignment Length:1142 Identity:229/1142 - (20%)
Similarity:400/1142 - (35%) Gaps:332/1142 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DSVKQAIIEELQNLLSSDTGVLQQTEKRIKQLEYTEGYGVYLSEIIMNQAHELPLRQIAIVMLTR 75
            :|....:::.|....|.|:.||:..|:::||.|...|:...|..|..|.:.::.:|.:|::....
 Frog     4 NSASGVVLQVLTQASSQDSAVLKPAEEQLKQWETQPGFYTVLLNIFTNHSLDVNVRWLAVLYFKN 68

  Fly    76 YVENHWTDDDDVKRKANGCMASEQAKRTIRNILPNGLYDPNSKIRSSVAHTISTIAATDYPHCWA 140
            .::.:|       |:......||:.|.|:|..|.....:|.::|.:.:|..|:.:|..|.|..|.
 Frog    69 GIDRYW-------RRVAPHALSEEEKATLRAGLITNFNEPVNQIATQIAVLIAKVARLDCPKQWP 126

  Fly   141 ELFDIIVKCLGGNED-SIHGAMQVLQDFSYDVEQI---------KELGPVVIPEVYRIFDSEQNY 195
            ||...:::.:...:| ..|.|:...    |.|.:.         ::|...:..|:|....|..|:
 Frog   127 ELIPTLIESVKIQDDLRQHRALLTF----YHVTKTLSSKRLAADRKLFQDLASEIYSFTCSLWNH 187

  Fly   196 SIKT---------RVSAIRILKPLFASIAAL-------ITNKEEQSTMMSSILTNFMDKLMHYL- 243
            ...|         ..:||..|:....|:..|       .....:.:.:...:|..|: :|..:| 
 Frog   188 HTDTFLQQICSGGETAAINSLERTLLSLKVLRKLTVHGFLEPHQNADVTGFLLAVFV-RLKQFLD 251

  Fly   244 -SMNSGAVSSFLLRTE-IIKVFTHLVNEMPKYINPFMDR----VLPIVWQLLTQIAETYVKVSVN 302
             |.|.||.:....|.| ||.:||       |.:..|:|:    .:|::.:.| :.|.:||     
 Frog   252 CSRNIGAENVCRERLEKIIILFT-------KVLLDFLDQHPISFIPLIQRSL-EFAVSYV----- 303

  Fly   303 QTETSPLASGDSEEDDEQTNFQSLIIQILEFINCIL-----------------TCN----KLRGS 346
            .||     :||.      ..|:..|:|.:..|..|:                 |.|    ||...
 Frog   304 FTE-----AGDG------IVFERFIVQCMSLIKMIVKEDSYIPSKNFEDSKPETINAHQIKLSFF 357

  Fly   347 IKNVLADLIYITIV-YIQLSEEQLEDWHDDPEKFVDDEDDG-GVELTVRMCGRDVLLAINDEFGA 409
            ....|.::....:. |..||:|:|..|.:|||.|..:|..| ..:.::|.|...:.:.|..|:. 
 Frog   358 THQTLTEICRRLVTHYFILSDEELAMWEEDPEGFAVEETGGDSWKYSLRPCSEVLFIDIFHEYS- 421

  Fly   410 NAIQPLQEALGRHFSVADAEKAANNPNWWKIQEACMDAVHAFRDVILAGDSTFDLLNYLTIVRNL 474
               :.|...|..............:.|..:|:|...:||.      ||....||.:::....::.
 Frog   422 ---ETLTPVLLNMVDTIKGPTCVEDLNTLRIKETVYNAVG------LAAYELFDCIDFDEWFQSQ 477

  Fly   475 LV------HQESPPLVGRALWT----LSIYSKSDLYNPQMLTEILDVTLCSLSPEKSHILRISAV 529
            |:      |.....|..|.:|.    :|:..|:|| .|.:...||     ||..:...::||...
 Frog   478 LLGELQVAHDRYKLLRRRVIWLIGQWISVKFKADL-RPLLYEAIL-----SLLQDPDLVVRIETA 536

  Fly   530 RTLNGFLQANETIDGEKRTLLVSKLPGFLDGIMALVPGSKAAVLALLMEALTFMVKFDAEFAFAS 594
            .||      ..|:|                                             :|.|.:
 Frog   537 TTL------KLTVD---------------------------------------------DFEFRT 550

  Fly   595 QAKITPLAIAVFLKYTEDPYVLETVQDLIKALCQRKECLGPLQ----------------EKFIPT 643
            :.         ||.|.|..:.|     |.:.|.|..||...:|                ..|:..
 Frog   551 EQ---------FLPYLETTFSL-----LFQLLQQVTECDSKMQVLHVLSCVIERVNMQIRPFVGC 601

  Fly   644 IVSILGLTGAASTEKQDIALDVLNTIVRYTEPPLNNSLLETAFPAIINCV-LHTD----DHAVMV 703
            :|..|.|....|.|...:...:|:|:|...:....:|  |..:|.::..: |.||    .|..::
 Frog   602 LVQYLPLLWKQSEEHNMLRCAILSTLVHLIKGLGGSS--ENLYPFLLPVIQLSTDVSQPPHVYLL 664

  Fly   704 AGG-----ECLRSFINVSPEQICSYKN--------GEGINCIMQVVATVLLNPMNS--------- 746
            ..|     ..|.:..:|:||.:..:.|        .|.:....:::...:.:..:.         
 Frog   665 EDGLELWLVTLENCSSVTPELLRIFHNMAALLELSSENLLICFKIINAYIFSSSSEFLQIYAANL 729

  Fly   747 ---------EMTAAGQIGRL-VITIITKMGSMLG-QNVDMLLKAVISKMQNLECLKVIMNLVL-I 799
                     ::|..||:..| |:..:.|:...:| |....||..|...:...|...|:|:..| |
 Frog   730 CQAFLELLRDITNEGQVQVLKVVENVLKVNPAVGPQMFQALLPPVFRGIIEGEKYPVVMSTYLGI 794

  Fly   800 FAHLFLTQMDAVLNFLSTVPGP-NGEPAMQFVLTN----WLSRQNSFFGNYERKVTTMALCKLFE 859
            ...:.|.......:.|..:... |.||..  :|.|    |:.|.::......||::.:||..|..
 Frog   795 LGRVLLQNQCCFSSLLYQLSQEYNCEPDQ--ILGNLIEMWVDRMDNITQPERRKLSALALLSLLP 857

  Fly   860 ---------------------YGVATQDNRLTTITFKELVDDPTDTRRRTRSVAATTQKWVTIPA 903
                                 :.|.|:|..  |.|:|:.                          
 Frog   858 SANSIIQDKFCGIINVCVESLHDVMTEDPE--TSTYKDC-------------------------- 894

  Fly   904 LVKIFKVLISEYQHFQEGKSDEPLTDSEEDGDDEDAPGNPDKPRYISDLFESDEDNA-------- 960
                  :|:|   |.::.:..|          ||:.|...||.:.:..|  .|..:|        
 Frog   895 ------MLMS---HLEDPQVIE----------DEEPPTEQDKRKKMLAL--KDPVHAVSLQQFVY 938

  Fly   961 EDEQLLQELLKETNYQG-------DIADNLQKFLTTF 990
            |..:..||||.|..::.       :|...||:||..|
 Frog   939 EKLKAQQELLGEEGFRSLMETVDTEIVTQLQEFLKGF 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp9NP_001287284.1 SXM1 14..891 CDD:227943 204/1023 (20%)
IBN_N 36..114 CDD:281761 18/77 (23%)
ipo11NP_001039123.1 CSE1 10..>681 CDD:227944 163/789 (21%)
IBN_N 28..100 CDD:281761 18/78 (23%)
HEAT repeat 515..545 CDD:293787 10/85 (12%)
HEAT repeat 552..586 CDD:293787 11/47 (23%)
HEAT repeat 599..630 CDD:293787 8/30 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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