DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ranbp9 and Cse1

DIOPT Version :9

Sequence 1:NP_001287284.1 Gene:Ranbp9 / 41367 FlyBaseID:FBgn0037894 Length:1018 Species:Drosophila melanogaster
Sequence 2:NP_523588.2 Gene:Cse1 / 35016 FlyBaseID:FBgn0022213 Length:975 Species:Drosophila melanogaster


Alignment Length:1118 Identity:213/1118 - (19%)
Similarity:391/1118 - (34%) Gaps:328/1118 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QAIIEELQNLLSSDTGVLQQTEKRIKQLEYTEGYGVYLSEIIMNQAHELPLRQIAIVMLTRYVEN 79
            |.:...||..||:|..|.:..||.::..|..:.|.:.|..:|.....::..|....:....|::.
  Fly     9 QLLAGYLQQTLSADPNVRRPAEKLLESTELQQNYPILLLNLIDKAQMDMTTRVAGAIAFKNYIKR 73

  Fly    80 HWT---DDDDVKRKANGCMASEQAKRTIRNILPNGLYDPNSKIRSSVAHTISTIAATDYPHCWAE 141
            :|.   |.|...|      ..|..:.||:.::...:......::..::..:|.|...|:|..|.:
  Fly    74 NWAAHLDSDGPDR------IHESDRNTIKTLIVTLMLHSPVALQKQLSDAVSIIGKYDFPKKWPQ 132

  Fly   142 LFD-IIVKCLGGNEDSIHGAMQ----VLQDFSYDVEQIKELGPVVIPEVYRIFDSEQNYSIKTRV 201
            |.| ::.:...|:.:.|:|.:|    :.:.:.|:.:     ...:..|:..:.|           
  Fly   133 LIDEMVERFASGDFNVINGVLQTAHSLFKRYRYEFK-----SQALWEEIKFVLD----------- 181

  Fly   202 SAIRILKPLFASIAAL--ITNKEEQST------MMSSILTNFMDKLMHYLSMNSGAVSSFL---- 254
               |:.|||...:.|.  :|...|.:.      ..|.:|.|.:     :.|:||..:..|.    
  Fly   182 ---RMAKPLTDLLQATMQLTKVHENNAGALKVIYGSLVLVNKV-----FFSLNSQDLPEFFEDNI 238

  Fly   255 -----------------LRT---EIIKVFTHLVNEM--------PKY---INPFMDRVLPIVWQL 288
                             |||   |...|..||..::        .||   ..|||::.:..||:|
  Fly   239 NTWMGAFIQQLAADVPSLRTADDEDAGVLEHLRAQVCENICLYAKKYDEEFKPFMEQFVTAVWEL 303

  Fly   289 LTQIAETYVKVSVNQTETSPLASGDSEEDDEQTNFQSLIIQILEFINCILTCNKLRGSIKN--VL 351
            |       ||.|::                  |.:.||:...|:|::.:......:...:|  :|
  Fly   304 L-------VKTSLH------------------TKYDSLVSHALQFLSVVADRQHYQSIFENPEIL 343

  Fly   352 A---DLIYITIVYIQLSEEQLEDWHDDPEKFVDDEDDGGVELTVRMCGRDVL--LAINDE----- 406
            |   |.:.|..:.|:.|:|::  :.|.||:::..:.:|....|.|....|::  |:||.|     
  Fly   344 AQICDKVVIPNLDIRPSDEEI--FEDSPEEYIRRDIEGSDIDTRRRAACDLVKTLSINFEQKIFG 406

  Fly   407 -FGANAIQPLQEALGRHFSVADAEKAANNPNWWKIQEACMDAVHAFRDVILAGDS-------TFD 463
             ||    |.|:..|.::     .|..|.|   |:.::.   |::........|.:       |.:
  Fly   407 IFG----QYLERLLTKY-----KENPATN---WRSKDT---AIYLVTSWASRGGTQKHGITQTSE 456

  Fly   464 LLNYLTIVRNLLVHQ-------ESPPLVGRALWTLSIYSKSDLYNPQMLTEILDVTLCSLSPEKS 521
            |:.........::.:       |.|.|...|:..:.::  ..:..||:|...|...:..| |.:|
  Fly   457 LVPLPEFCAQQIIPELERPNINEFPVLKAAAIKYVMVF--RSILGPQVLASCLPQLIRHL-PAES 518

  Fly   522 HILRISAVRTLNGFLQ----ANETIDGEKRTLLVSKLPGFLDGIMAL--VPGS--KAAVLALLME 578
            .::...|..::...|.    :|..:.|.:  :|.......:.|:.|.  :|||  ...|:..:|.
  Fly   519 SVVHSYAACSVEKILSMRDASNAIVFGPQ--ILAPYTTELISGLFATLSLPGSGENEYVMKAIMR 581

  Fly   579 ALTFMVKFDAEFAFASQAKITPLAIAVFLKYTEDP-------YVLETVQDLIKALCQR-KECLGP 635
              :|.|...|...|...|  .|....:..:..::|       |:.||:...||.:|.. ...:..
  Fly   582 --SFSVLQSAAMPFMGVA--LPRLTEILTQVAKNPSRPQFNHYLFETLALCIKIVCHADSSAVSS 642

  Fly   636 LQEKFIPTIVSILGLTGAASTEKQDI------ALDVLNTIVRYTEPPLNNSLLETAFPAIINCVL 694
            .:|...|....||         :|||      ...:|:.::...|   ....:...:.|:..|:|
  Fly   643 FEEALFPVFQGIL---------QQDIVEFMPYVFQMLSVLLEMRE---GTGTIPEPYWALFPCLL 695

  Fly   695 HTDDHAVMVAGGECLRSFINVSPEQICSYKNGEGINCIMQVVATVLLNPMNSEMTAAGQIGRLVI 759
               ..|:....|       ||:|              ::::::..:            :.|...|
  Fly   696 ---SPALWDRTG-------NVTP--------------LIRLISAFI------------KQGSAQI 724

  Fly   760 TIITKMGSMLGQNVDMLLKAVISKMQNLECLKVIMNLV-----------------LIFAHLFLTQ 807
            ..:.|:..:||    :..|.:.||..:.|...::.||:                 |:|..|    
  Fly   725 QALGKLSGILG----IFQKMIASKANDHEGFYLLQNLLSYYPPAEIQTNLRQIFGLLFQRL---- 781

  Fly   808 MDAVLNFLSTVPGPNGEPAMQFVLTNWLSRQNSFFGNYERKVTTMALCKLFE------YGVATQD 866
                  .||..|             .:||....||..|..|.:...:.:|.:      :|:.   
  Fly   782 ------SLSKTP-------------KYLSGIIIFFSFYVIKFSGSQMAQLIDEIQPNLFGML--- 824

  Fly   867 NRLTTITFKELVDDPTDTRRRTRSVAATTQKWVTIPALVKIFKVLISEYQHFQEGKSDEPLTDSE 931
              |..:...|:...|.:..|:..:|..|       ..|.:..::|..:|..|.            
  Fly   825 --LDRVFITEMGKIPKEQDRKMVAVGVT-------KLLTETPEILQQQYATFW------------ 868

  Fly   932 EDGDDEDAPGNPDKPRYIS---DLFESDEDNAEDEQLLQELLKETNYQGDIADNLQKFLTTFTQN 993
                          ||.:.   ||||     ...|:|:...:.||  .|...|....:...|.|.
  Fly   869 --------------PRLLHSLIDLFE-----RPPEKLMGLEIGET--AGVAEDPDAGYQVAFAQL 912

  Fly   994 EHF-PTFYEHLTE 1005
            .|. |...:||.|
  Fly   913 THAQPNQQDHLAE 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ranbp9NP_001287284.1 SXM1 14..891 CDD:227943 188/998 (19%)
IBN_N 36..114 CDD:281761 15/80 (19%)
Cse1NP_523588.2 IBN_N 29..105 CDD:281761 15/81 (19%)
Cse1 159..528 CDD:285678 85/437 (19%)
CAS_CSE1 530..966 CDD:281384 95/522 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446873
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5657
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10997
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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