DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Blm and recql4

DIOPT Version :9

Sequence 1:NP_524319.2 Gene:Blm / 41366 FlyBaseID:FBgn0002906 Length:1487 Species:Drosophila melanogaster
Sequence 2:NP_001072882.1 Gene:recql4 / 780344 XenbaseID:XB-GENE-997814 Length:1520 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BlmNP_524319.2 RQC 1140..1253 CDD:286470
HRDC 1286..1352 CDD:278967
RecQ 729..1359 CDD:223588
DEAD 739..908 CDD:278688
HELICc 931..1061 CDD:238034
RecQ_Zn_bind 1066..1134 CDD:292742
recql4NP_001072882.1 TFIIS_I 433..>547 CDD:294098
ZnF_C2HC 606..621 CDD:197667
RecQ 712..>1178 CDD:223588
DEAD 723..876 CDD:278688
HELICc 928..1085 CDD:238034
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D445763at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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