DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

powered by:

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Blm and RECQL

DIOPT Version :10

Sequence 1:	NP_524319.2	Gene:	Blm / 41366	FlyBaseID:	FBgn0002906	Length:	1487	Species:	Drosophila melanogaster
Sequence 2:	NP_002898.2	Gene:	RECQL / 5965	HGNCID:	9948	Length:	649	Species:	Homo sapiens

Alignment Length:	43	Identity:	11/43 - (25%)
Similarity:	19/43 - (44%)	Gaps:	3/43 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly    28 TDSIKIRKAKRVLALSPRQYTLVSSNSSWSEHKRGLRRHLDRT 70
            |..:|....||..|::.:.:   ||||.......|.:.:.:.|
Human   195 TGGLKFNIQKRPFAVTSQSF---SSNSEGQHSSFGPQPNSENT 234

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Blm	NP_524319.2	RecQ	733..1217	CDD:440280
Blm	NP_524319.2	HRDC	1283..1357	CDD:470625
RECQL	NP_002898.2	recQ_fam	81..543	CDD:129701	11/43 (26%)
		DEVH box	219..222		0/2 (0%)
		Winged-helix domain. /evidence=ECO:0000269\|PubMed:19151156	481..592
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	595..649
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.