DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Blm and wrn

DIOPT Version :9

Sequence 1:NP_524319.2 Gene:Blm / 41366 FlyBaseID:FBgn0002906 Length:1487 Species:Drosophila melanogaster
Sequence 2:XP_009302246.2 Gene:wrn / 569495 ZFINID:ZDB-GENE-070702-2 Length:1387 Species:Danio rerio


Alignment Length:1287 Identity:304/1287 - (23%)
Similarity:504/1287 - (39%) Gaps:327/1287 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   385 MEKYCSLIDQIPAMHFNEIAGFQPNTFLKLK---VMRQKFKARTQLVQNSLDKKESQLKAEQEAL 446
            |.:.|:..|:....|.:.::||.|...:.|:   :|:         |...::..:.:|.::.:..
Zfish    87 MVQLCASEDKCYLFHISSMSGFPPGLKMFLEDENIMK---------VGVGIEGDKWKLLSDYDIK 142

  Fly   447 EKEEIEMQAEQAQQTVLSSSSPEKSR---------PIMPLPKVQEIKDEKIPNRNQLIHDLCGEP 502
            .|..::          ||..:.||.|         .:..|.|.|..||:.:         .|...
Zfish   143 LKNIVD----------LSDLANEKLRCCEKWSLDGLVKHLLKKQLFKDKLV---------RCSHW 188

  Fly   503 DNFSPPSSPR---------DTQLIPKRQQLINDLCGEPDDFSPPSKQNDPHLLRKCEELVHDLCE 558
            |:||.....:         ...:..|.|::|:...|..   :|..|:....:....::|...:..
Zfish   189 DDFSLTEDQKRYAATDAYAGLLIYQKLQEMISGCSGSS---APSLKERVLKIACDLKDLADHIPN 250

  Fly   559 EPD---------DYLAQSM------MLDGDLEEEQL--NGPTQGTTTSGMDDDEDDLEGLLAEIE 606
            |.|         |.|:|::      :.:.:...|||  ..|:.|..   :||.....||:....|
Zfish   251 ELDCTDGAGRLVDDLSQTLTSLRCVLSNANKPTEQLVEEKPSPGLI---LDDTSSHHEGVPTTEE 312

  Fly   607 DEH-----------QKMQGRRSEFNGYSYKELEAVKVKE------------KHKETP--INISLD 646
            ..|           |:......:.:.|..:.||....:|            :|...|  :|.:..
Zfish   313 QSHSQCVENPGRPPQRECAMSLDISEYELQMLEEQARQEQLEEECILAFQTQHASGPQDLNATES 377

  Fly   647 DDGFPEYDEAMFEQMHSQAAANKSRVSSAGPSTSKSVVPTKQTSALHSQKLSGNFHANVHNDGIT 711
            |:   |:|:.|.:........|.:::..:|.......|...:...|.|              .|.
Zfish   378 DE---EFDDEMMKCADDIEKINNAQMPQSGAEDEDEDVEENEEEGLDS--------------SIP 425

  Fly   712 GEFDGQKFEHSTRLMHGLSYSFGLKSFRPNQLQVINATLL-GNDCFVLMPTGGGKSLCYQLPAIL 775
            .....|        :..|...||..||:|.|.:||.:.|. ..|..|:|.||.|||||:|.|.:.
Zfish   426 QPVPEQ--------IKCLKMFFGHHSFKPVQWKVIQSILTERRDNLVVMATGYGKSLCFQFPPVY 482

  Fly   776 TEGVTIVISPLKSLIFDQINKLASLDICA--------KSLSGEQKMADVMAIYRDLESQPPMVKL 832
            .:.:::|||||.:|:.||:.:|...:|.|        |:|:.:.|..|              .::
Zfish   483 CQTISVVISPLIALMEDQVLQLTMSNIPACFLGSAQTKNLNEQVKRGD--------------FRV 533

  Fly   833 LYVTPEKISSSARFQDTLD-TLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPT 896
            :|:|||..|.:......|| |:.    :|...:|||||:||||||||..|::||.|||..|.||.
Zfish   534 VYMTPEFCSGNIPLLVQLDRTVG----LSLIAVDEAHCISQWGHDFRSAYRELGKLKKNLPTVPF 594

  Fly   897 IALTATATPRVRLDILAQLNLKNCKWFLSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKP---QH 958
            :||||||:|.:|.||:..|:|.|.....:||:|.|| |..:.:|....:.|:.|::..|.   ..
Zfish   595 LALTATASPSIRDDIIKSLHLINPMITCTSFDRPNL-YLDVNRKSGDVIQDLKRFLVKKKGGGYE 658

  Fly   959 FSG--IIYCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGMG 1021
            |.|  |:||.|:||.:..:..:.|..:....|||||:...|...|..::..:::.:.||||||||
Zfish   659 FEGSAIVYCPSKKEAERVTTALFKLDIPCGVYHAGLSIKQRRETQHQFMRDEIQCVVATVAFGMG 723

  Fly  1022 IDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKMLDSDKALQYNVKK 1086
            |:|.|:|.|:||..||.:|.||||.|||||||..:.|.:.:...||...|.:|:..|:.::...|
Zfish   724 INKSDIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLWMPGDMALNKFILNQSKSERFRSYK 788

  Fly  1087 IHVDNLYRIVGYCENLTDCRRAQQLDYFGEH---------FTSEQCLENRETACDNC---INKRA 1139
            |  |.:.::..|. |.|.|||...|.:|.:.         ..|.||       ||||   :|:..
Zfish   789 I--DMMAKMEKYL-NSTKCRRKLILCHFEDKRLRKVTSGILGSSQC-------CDNCRSGVNEED 843

  Fly  1140 YKAVDALEHARKAARAVKDLCSGRSRFTLLHIADVLKGSKIKKIID-FNHHKTPHHGVLKDWDKN 1203
            .:.:.. :....|.:.:|.:.....||.:......|:||..:::.: |..|..  .|:.:|..:.
Zfish   844 LEVLQQ-DFGLCAYQLMKAISVMEERFGITAPILFLRGSCSQRVPERFRKHSL--FGIGRDVSET 905

  Fly  1204 DVHRLLRKMVIDGFL-------------------REDLIFTNDFPQAYLYLGNN----------- 1238
            ....|.|:::.:.:|                   |..|....|.....|.|..|           
Zfish   906 WWKALGRELIAEKYLMEVTGHSKFTTLCKITTKGRSWLSKAEDEKHRQLLLQPNRDLFSRVCAPR 970

  Fly  1239 -----------ISKLMEGTPNFE-----FAVTKNAKEAKAAV--GSVSDGATSSTADGQSGMR-- 1283
                       :|.|.  :|:..     |..||...|:...|  |.:...:.:.....|:.:|  
Zfish   971 RKADPAQVEPTVSNLQ--SPHIRPSLVTFQRTKLGSESPQIVKKGDLPSRSAARQTQIQTDVRAQ 1033

  Fly  1284 ---------EIHERCYTDLLDLCRTIASQRNVTMASIMNIQALKSMAETLPITEKDMCSIPHVTK 1339
                     ::....|..|:...:.:||.|::..|.:...:.|..|::..|.|...:..:..|::
Zfish  1034 TPGASAKEIQLQSELYGKLVSERQKLASIRDIPPALLATNKILLDMSKLRPCTMSSLKQVDGVSE 1098

  Fly  1340 -------------ANFDKYGAKLLEITSNYAS--------------------------------- 1358
                         |.|.:.....::::||.||                                 
Zfish  1099 AKAAMLTPLIDIIAKFCQTHGLQVDVSSNSASSVQTHSCRESVVGSVAQCLPDSISITYSLFQTE 1163

  Fly  1359 EKLLMQ---------AVLDEEEEQAAAKQRPSTSGWNNESVDWDMAVASQGNANT----SGASGF 1410
            .|.|.|         ||::....||   |:...      :||.|.|..|....||    :..|..
Zfish  1164 HKSLRQVSDARSLPIAVVESHLLQA---QKMGC------AVDTDRAGLSTSIMNTIRKNTAGSDL 1219

  Fly  1411 NSFRAGK------------RKKIY----KSGASKRYKTSTTSPAARKTTSAR 1446
            ..|:|.:            |..||    ::.::.|::.|...|..:.||:.|
Zfish  1220 CDFKAVRSRVPEDISNFLLRLAIYELQKEASSTTRHEISWIEPLDKSTTATR 1271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BlmNP_524319.2 RQC 1140..1253 CDD:286470 24/159 (15%)
HRDC 1286..1352 CDD:278967 13/78 (17%)
RecQ 729..1359 CDD:223588 209/762 (27%)
DEAD 739..908 CDD:278688 70/178 (39%)
HELICc 931..1061 CDD:238034 53/134 (40%)
RecQ_Zn_bind 1066..1134 CDD:292742 21/76 (28%)
wrnXP_009302246.2 WRN_exo 48..217 CDD:176653 27/157 (17%)
DEXDc 433..901 CDD:331760 171/499 (34%)
HRDC 1045..1116 CDD:322002 13/70 (19%)
HTH_40 1155..1242 CDD:316965 19/95 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D445763at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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