DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Blm and recql

DIOPT Version :9

Sequence 1:NP_524319.2 Gene:Blm / 41366 FlyBaseID:FBgn0002906 Length:1487 Species:Drosophila melanogaster
Sequence 2:XP_005164818.1 Gene:recql / 566018 ZFINID:ZDB-GENE-050809-134 Length:798 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BlmNP_524319.2 RQC 1140..1253 CDD:286470
HRDC 1286..1352 CDD:278967
RecQ 729..1359 CDD:223588
DEAD 739..908 CDD:278688
HELICc 931..1061 CDD:238034
RecQ_Zn_bind 1066..1134 CDD:292742
recqlXP_005164818.1 DEXDc 89..542 CDD:331760
GTP_EFTU 599..>734 CDD:332590
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D360651at33208
OrthoFinder 1 1.000 - - FOG0001239
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100352
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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