DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Blm and Recql5

DIOPT Version :9

Sequence 1:NP_524319.2 Gene:Blm / 41366 FlyBaseID:FBgn0002906 Length:1487 Species:Drosophila melanogaster
Sequence 2:XP_006532421.1 Gene:Recql5 / 170472 MGIID:2156841 Length:983 Species:Mus musculus


Alignment Length:862 Identity:270/862 - (31%)
Similarity:393/862 - (45%) Gaps:171/862 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   719 FEHSTRLMHGLSYSFGLKSFR-PNQLQVINATLLG-NDCFVLMPTGGGKSLCYQLPAILTEGVTI 781
            |:...|:...|...||..||: |.|.....|.:.| .|.||.||||.||||||||||:|..|:||
Mouse    11 FDRERRVRSTLKKVFGFDSFKTPLQESATMAVVKGAEDVFVCMPTGAGKSLCYQLPALLASGITI 75

  Fly   782 VISPLKSLIFDQINKLASLDICAKSLSGEQKMADVMAIYRDLESQPPMVKLLYVTPEKISSSARF 846
            |:|||.:||.||::.|.:|.:...||:.:..:.:...:..|||...|..||||:||| :::||.|
Mouse    76 VVSPLIALIQDQVDHLLALKVQVSSLNSKLSVQERKELLSDLERDKPRTKLLYITPE-MAASASF 139

  Fly   847 QDTLDTLNSNNYISRFVIDEAHCVSQWGHDFRPDYKKLGVLKKRFPNVPTIALTATATPRVRLDI 911
            |.||::|.|.|.:|..|:|||||||||||||||||.:||.|:.|..:.|.:||||||||:|:.|:
Mouse   140 QPTLNSLVSRNLLSYLVVDEAHCVSQWGHDFRPDYLRLGALRSRLAHAPCVALTATATPQVQEDV 204

  Fly   912 LAQLNLKNCKWFLSSFN----RSNLRYRV-----LPKKGVSTLDDISRYIRSKPQHFS----GII 963
            .|.|:||..   ::||.    |:||.|.|     :|....:..|...:.:..|.::.|    ||:
Mouse   205 FAALHLKQP---VASFKTPCFRANLFYDVQFKELIPDVYGNLRDFCLKALGQKAENGSSSGCGIV 266

  Fly   964 YCLSRKECDETSKKMCKDGVRAVSYHAGLTDTDRESRQKDWLTGKMRVICATVAFGMGIDKPDVR 1028
            ||.:|:.|::.:.::...||.|.:|||||..:||...|.:|:..|:.||.||::||||:||.:||
Mouse   267 YCRTREACEQLAIELSSRGVNAKAYHAGLKASDRTQVQNEWMEEKVPVIVATISFGMGVDKANVR 331

  Fly  1029 FVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSD----MLRIKKML----------DSDKA 1079
            ||.|:::.||:.|||||:|||||||..:.|.|||:.:|    ...|:|.|          .||||
Mouse   332 FVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKELAKLQEKRGNKPSDKA 396

  Fly  1080 --LQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDNCINKRAY-K 1141
              |.::.          :|.:||.: .||.|....|||:  ....|.:    .||.|.|..|. |
Mouse   397 TLLAFDA----------LVTFCEEV-GCRHAAIAKYFGD--APPACAK----GCDYCQNPAAITK 444

  Fly  1142 AVDALEHARKAARAVKDLCSGRSR---FTLLHIADVLKGSKIKKIIDFNHHKTPHHGVLKDWDKN 1203
            .:||||.:...::.    |.|.|:   |.    .::.:|.: :....|:.:.....| ..|..::
Mouse   445 KLDALERSSSWSKT----CIGPSQGNGFD----PELYEGGR-RGYGGFSRYDEGSGG-SGDEGRD 499

  Fly  1204 DVHRLLRKMVIDGFLREDLIFTNDFPQAYLYLGNNISKLMEGTPNFEFAVTKNAKEAK------- 1261
            :.|:           ||..:|..  .|..|..|.. .|:.|.||..|....:.|...|       
Mouse   500 EAHK-----------REWNLFYQ--KQMSLRKGKE-PKIEEFTPPDEDCPLREASSRKIPKLTVK 550

  Fly  1262 -----------AAVGSVSDGATSSTADGQSGMREIHERCYTDLLDLCRTIASQRNVTMASIMNIQ 1315
                       |.:.:.....::..||.|:...|:....:             ||..|.::....
Mouse   551 AREHCLRLLEEALISNHQAAGSTHGADLQAKAVELEHETF-------------RNAKMVNLYKAS 602

  Fly  1316 ALKSMAE----------------------TLPITEKDMCSIP---HVTKANFDKYGA-------- 1347
            .||.:||                      ....:|.....||   ||......:.||        
Mouse   603 VLKKVAEIHKASKDGQLYDMESGTKSCGAAAEFSEPSDYDIPPTSHVYSLKPKRVGAGFSKGPCS 667

  Fly  1348 --KLLEITSNYASEKLLMQAVLDEEEEQAAAKQRPSTSGWNNESVDWDMAVASQGNANTSGASGF 1410
              ...|:.....|:|...:|:|:..:|         ..||..:..|.|.:....|....:..|..
Mouse   668 FQTATELLGKSHSQKQAPEAMLEGGQE---------PPGWVCDLQDEDRSKPHPGYQEKALGSSV 723

  Fly  1411 NSFRAGKRKKI-------YKSGASKRYKTSTTSPAARKTTSARGRGGRAGAKRAESSASSASGWK 1468
            |.......||.       .|:.|||:.:...|  ||||.:.   ...|...:|.||....||..:
Mouse   724 NCGDPSPEKKTKGSSQGSAKARASKKQQLLAT--AARKDSQ---NITRFLCQRTESPPLPASVPR 783

  Fly  1469 SKKTGNSFGFDLMPLPG 1485
            |:....|.|    .:||
Mouse   784 SEDASPSCG----DVPG 796

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BlmNP_524319.2 RQC 1140..1253 CDD:286470 25/116 (22%)
HRDC 1286..1352 CDD:278967 14/100 (14%)
RecQ 729..1359 CDD:223588 234/717 (33%)
DEAD 739..908 CDD:278688 89/170 (52%)
HELICc 931..1061 CDD:238034 57/138 (41%)
RecQ_Zn_bind 1066..1134 CDD:292742 21/83 (25%)
Recql5XP_006532421.1 RecQ 16..>440 CDD:223588 187/444 (42%)
RecQ5 627..815 CDD:311110 42/188 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0514
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D445763at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R580
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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