DRSC/TRiP Functional Genomics Resources

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Protein Alignment mgr and pfd-3

DIOPT Version :10

Sequence 1:NP_650067.1 Gene:mgr / 41365 FlyBaseID:FBgn0264694 Length:194 Species:Drosophila melanogaster
Sequence 2:NP_493228.1 Gene:pfd-3 / 173141 WormBaseID:WBGene00006889 Length:185 Species:Caenorhabditis elegans


Alignment Length:169 Identity:64/169 - (37%)
Similarity:112/169 - (66%) Gaps:8/169 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GIPEAVFLEEIDTFMSQPE--NENCEKVLQRLDEQHGKYRFMACNLEARRRKLKSQIPDLERSLE 84
            |||::..:|::::::::.:  .|..|.||:   |::|||:::..::.|::.::..:||:.|.||.
 Worm    12 GIPKSELIEDVESWLTKEKLSIEEAEVVLR---EKYGKYKYVESSMLAQKVRMSEKIPEFENSLS 73

  Fly    85 MVNVL---RKEDEERETQFLLSDQVFIKTLVPPTKTVYLWLGASVMLEYPLDEAEALLNQNITSA 146
            :::.|   |..||..||.|||||.|:.|..|...:.|.:||||:||:||.|:.|..||::|..|.
 Worm    74 IIDTLIAKRAADESFETTFLLSDDVYTKATVQKPEKVSIWLGANVMVEYDLENARKLLDKNRGSV 138

  Fly   147 VGNLKSVEHDQDFLRDQITTTEVNMARVYNWGVKKRQAA 185
            ...:..:.::..:::||||||||||:.:.|:||.||:||
 Worm   139 QKVVDELTNELSYIKDQITTTEVNMSHIVNFGVNKRRAA 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mgrNP_650067.1 Prefoldin_3 50..175 CDD:467472 49/127 (39%)
coiled coil 50..89 CDD:467472 10/38 (26%)
coiled coil 133..175 CDD:467472 15/41 (37%)
pfd-3NP_493228.1 Prefoldin_3 40..166 CDD:467472 50/128 (39%)
coiled coil 40..78 CDD:467472 11/40 (28%)
coiled coil 125..166 CDD:467472 15/40 (38%)

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