DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL40 and MRPL28

DIOPT Version :10

Sequence 1:NP_524318.1 Gene:mRpL40 / 41364 FlyBaseID:FBgn0037892 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_010750.1 Gene:MRPL28 / 852073 SGDID:S000002870 Length:147 Species:Saccharomyces cerevisiae


Alignment Length:108 Identity:23/108 - (21%)
Similarity:50/108 - (46%) Gaps:1/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 KNARQLKPVDELEVPLELIDEKDKRQRKLAPLTIDQLEERALLKKQWAHYKHDERVADFQIIDRL 133
            |:...|.|:.:..|....:....::|.||..|..:.|.:...::|.|:.|:..:|......::..
Yeast    30 KSKSSLSPLAQRVVTQLSVMSASRKQPKLLKLAREDLIKHQTIEKCWSIYQQQQRERRNLQLELQ 94

  Fly   134 VQAQNKALAELRRESEELYQAAIDIDP-QLLPVAVKGPVATPP 175
            .::..:::..|:..|..|::||...:. :..|:.:|.|...||
Yeast    95 YKSIERSMNLLQELSPRLFEAANASEKGKRFPMEMKVPTDFPP 137

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL40NP_524318.1 MRP-L28 33..193 CDD:430845 23/108 (21%)
MRPL28NP_010750.1 MRP-L28 27..137 CDD:430845 21/106 (20%)

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