DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL40 and Mrpl40

DIOPT Version :10

Sequence 1:NP_524318.1 Gene:mRpL40 / 41364 FlyBaseID:FBgn0037892 Length:196 Species:Drosophila melanogaster
Sequence 2:NP_035052.2 Gene:Mrpl40 / 18100 MGIID:1332635 Length:206 Species:Mus musculus


Alignment Length:191 Identity:68/191 - (35%)
Similarity:106/191 - (55%) Gaps:19/191 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ARLSLQRSGGVAGAAFARCLHT------------TPVLCAEPLKKKKKLDPQIVKQREDRKKKKI 60
            |..:|:....:.|...|...||            .| :.||||:||||:||    :::...|.::
Mouse     9 AARALRPRSWIPGTCQAHVRHTHQRASLLAFWDLIP-MRAEPLRKKKKVDP----RKDQAAKDRL 68

  Fly    61 EKQIRRLEKNARQLKPVDELEVPLELIDEKDKRQRKLAPLTIDQLEERALLKKQWAHYKHDERVA 125
            :|:||:|||.:::|.|:::...|:..:|:  .|||.....:.::.|.||||.|:||.:|..|...
Mouse    69 KKRIRKLEKASQELIPIEDFITPVRFLDK--SRQRPQEEHSPEESERRALLLKRWALFKQQEHEM 131

  Fly   126 DFQIIDRLVQAQNKALAELRRESEELYQAAIDIDPQLLPVAVKGPVATPPIKDYVSPDGDY 186
            :...|..:::||.:||.||:.||.|||..||..|..|.|...:||..||||.:|.:|:|.|
Mouse   132 ERDAIRSMLEAQQEALEELKLESAELYAEAIKRDTSLFPFEKEGPHYTPPISNYQAPEGRY 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL40NP_524318.1 MRP-L28 33..193 CDD:430845 61/154 (40%)
Mrpl40NP_035052.2 MRP-L28 45..199 CDD:430845 61/154 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 170..189 8/18 (44%)

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