DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL40 and mRpL40

DIOPT Version :10

Sequence 1:NP_524318.1 Gene:mRpL40 / 41364 FlyBaseID:FBgn0037892 Length:196 Species:Drosophila melanogaster
Sequence 2:XP_311037.3 Gene:mRpL40 / 1272158 VectorBaseID:AGAMI1_006563 Length:197 Species:Anopheles gambiae


Alignment Length:202 Identity:122/202 - (60%)
Similarity:151/202 - (74%) Gaps:13/202 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSLLGAFARLSLQRSGGVAGAAFARCLH--------TTPVLCAEPLKKKKKLDPQIVKQREDRKK 57
            ||||...:||.     .:.|.:.||.:|        :||||||||||||||||||||||||:||:
Mosquito     1 MSLLPVLSRLL-----PLVGQSAARSVHSGTGLLFRSTPVLCAEPLKKKKKLDPQIVKQREERKR 60

  Fly    58 KKIEKQIRRLEKNARQLKPVDELEVPLELIDEKDKRQRKLAPLTIDQLEERALLKKQWAHYKHDE 122
            |::||||||||||||||||::|||||:|||||:.||:|.:...|.:.||.||||:||||.|:..|
Mosquito    61 KRLEKQIRRLEKNARQLKPIEELEVPMELIDEQSKRKRNVPKPTAELLESRALLEKQWAKYRMQE 125

  Fly   123 RVADFQIIDRLVQAQNKALAELRRESEELYQAAIDIDPQLLPVAVKGPVATPPIKDYVSPDGDYL 187
            ::||:|:.||:|.||.|||.||:..|:||||.||..||.|||...:|||:|||||||..|||:|:
Mosquito   126 KLADYQLFDRIVAAQAKALGELQLASDELYQRAIQPDPALLPFVAQGPVSTPPIKDYEQPDGEYI 190

  Fly   188 HQSMKWE 194
            ..|.|||
Mosquito   191 DVSRKWE 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL40NP_524318.1 MRP-L28 33..193 CDD:430845 106/159 (67%)
mRpL40XP_311037.3 MRP-L28 36..196 CDD:430845 106/159 (67%)

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