DRSC/TRiP Functional Genomics Resources

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Protein Alignment pros and prox2

DIOPT Version :10

Sequence 1:NP_001247045.1 Gene:pros / 41363 FlyBaseID:FBgn0004595 Length:1835 Species:Drosophila melanogaster
Sequence 2:NP_001121764.2 Gene:prox2 / 100003863 ZFINID:ZDB-GENE-081003-3 Length:582 Species:Danio rerio


Alignment Length:569 Identity:164/569 - (28%)
Similarity:233/569 - (40%) Gaps:158/569 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1325 HAAAAAAMSAQQQQQQSGDPGANTNPNS-GPANPTNSSLSTLNIPPPHIRPSPTAAAMFQAPKTP 1388
            |..|..|......:..:|.|.|.|:..: ......|.....|   |.|..||.|.::        
Zfish   110 HLQAKRARVENIIRGMAGSPNARTHGEADSDCRKENKRKQRL---PQHQEPSRTKSS-------- 163

  Fly  1389 QGMNPVAAAALYNSMTGPFCLPPDQQ----QQQQTAQQQQSAQQQQQSSQQTQQQLEQNEAL--- 1446
                                  .|::    ::|..:.|:...|.|::.|....|...:||.|   
Zfish   164 ----------------------KDEECHKLKEQLQSMQRLLHQLQEKISHVYDQNYLENEELDDD 206

  Fly  1447 -----------SLVVTPKKKRHKVTDTRITPRTVSRILAQDGVVPPTGGPPSTPQQQQQ-QQQQQ 1499
                       ...|...::..|...:|....::..:..:.....|...||...:.:.. .....
Zfish   207 RSENQTFGFSSDRAVKSFQETLKCELSRTVSESIDMVFKKLSKSLPKQSPPQHAETENAINPDSH 271

  Fly  1500 QQQQQQQQQQASNGGNSNATPAQS-----PTRSSGGAAYHPQPPPPPPPMMPVSLPTSVAIPNPS 1559
            .:|...::...|.....:.|.|.|     |:.|.|  ...|.|....|.....|.|         
Zfish   272 SEQSDSEEMPKSRSSFEDQTEALSLVVRKPSLSQG--VKRPFPLHQTPFQFGYSAP--------- 325

  Fly  1560 LHESKV------FSPYSPF------------FNPHA-----------AAGQATAAQLHQHHQQHH 1595
            ||:|::      |.|:|.|            .:|.:           .:|.|.|.  ||...||.
Zfish   326 LHDSQILEHLLKFGPHSAFSALPCLPATLERASPESLDHPWESVRSKVSGAAAAG--HQLQLQHQ 388

  Fly  1596 PHHQSMQLSSSPPGSLGALMDSRDSPPLPHPPSMLHPALLAAAHHGGSPDYKTCLRAVMDAQDRQ 1660
                    .::|.|.|..     ||..|||                          ..|:..|.|
Zfish   389 --------RAAPAGLLAV-----DSLCLPH--------------------------VKMEVADLQ 414

  Fly  1661 SECNSADMQFDGMAPTSS--------TLTPMHLRKAKLMFFWVRYPSSAVLKMYFPDIKFNKNNT 1717
            |           ||..||        .|||.||:|||||||:.|||||.:||.:|||:|||:..|
Zfish   415 S-----------MADRSSYMALNIQEGLTPNHLKKAKLMFFYTRYPSSNLLKNFFPDVKFNRCIT 468

  Fly  1718 AQLVKWFSNFREFYYIQMEKYARQAVTEGIKTPDDLLIAGDSELYRVLNLHYNRNNHIEVPQNFR 1782
            :||:||||||||||||||||:||||:.:|:....|:.::.:|||:|.||:|||:.|..:||..|.
Zfish   469 SQLIKWFSNFREFYYIQMEKFARQAIIDGVTDVKDISVSRESELFRALNMHYNKANDFQVPDRFL 533

  Fly  1783 FVVESTLREFFRAIQGGKDTEQSWKKSIYKIISRMDDPVPEYFKSPNFL 1831
            .|.|.||:||:.||...||::.||||:|||:|.::|..|||.||||::|
Zfish   534 EVAEVTLQEFYSAISLSKDSDPSWKKAIYKVICKLDSDVPEEFKSPSYL 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
prosNP_001247045.1 COG4372 821..>891 CDD:443500
HPD 1679..1832 CDD:461534 90/153 (59%)
prox2NP_001121764.2 HPD 430..582 CDD:461534 89/151 (59%)
Blue background indicates that the domain is not in the aligned region.

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