DRSC/TRiP Functional Genomics Resources

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Protein Alignment KP78a and Mark4

DIOPT Version :10

Sequence 1:NP_650066.1 Gene:KP78a / 41362 FlyBaseID:FBgn0026064 Length:705 Species:Drosophila melanogaster
Sequence 2:NP_001178000.1 Gene:Mark4 / 680407 RGDID:1591792 Length:752 Species:Rattus norvegicus


Alignment Length:699 Identity:294/699 - (42%)
Similarity:399/699 - (57%) Gaps:101/699 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SEKTAMTAANKENDPDSHFTGTIVTTGATAQPATPTTSNATALPATPTVAAGQDLGDGACSSKNT 82
            |.:||:...|..|. |:|  ||: .:|.::......:|.:.......::|        :|..:  
  Rat     2 SSRTALAPGNDRNS-DTH--GTL-GSGRSSDKGPSWSSRSLGARCRNSIA--------SCPEE-- 52

  Fly    83 DSKFQSYVNGNGNGVYKIIKTLGKGNFAKVKLAIHVPTGREVAIKVIDKTQLNTSARQKLYREVK 147
                |.:|     |.|::::|:|||||||||||.|:.||||||||:|||||||.|:.|||:|||:
  Rat    53 ----QPHV-----GNYRLLRTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPSSLQKLFREVR 108

  Fly   148 IMKLLNHPNIVRLFQVIESERTLYLVMEYASRGELFDHLVKNGRMRERDARVIFRQLVSAIQYCH 212
            |||.|||||||:||:|||:|:||||||||||.||:||:||.:|||:|::||..|||:|||:.|||
  Rat   109 IMKGLNHPNIVKLFEVIETEKTLYLVMEYASAGEVFDYLVSHGRMKEKEARAKFRQIVSAVHYCH 173

  Fly   213 SKFVVHRDLKAENLLLDQHMNIKIADFGFGNTFDPNAQLETFCGSPPYAAPELFMGRKYAGPEVD 277
            .|.:|||||||||||||...|||||||||.|.|...::|:||||||||||||||.|:||.|||||
  Rat   174 QKNIVHRDLKAENLLLDAEANIKIADFGFSNEFTLGSKLDTFCGSPPYAAPELFQGKKYDGPEVD 238

  Fly   278 AWSLGVVLYTLVSGSLPFDGGTLKELRERVLRGKYRVPYYISMDCENLMRKFLVLNPAKRTSLSA 342
            .|||||:|||||||||||||..||||||||||||||||:|:|.|||:::|:|||||||||.:|..
  Rat   239 IWSLGVILYTLVSGSLPFDGHNLKELRERVLRGKYRVPFYMSTDCESILRRFLVLNPAKRCTLEQ 303

  Fly   343 VMSDKWINLGHDESDRLRPFREKPMELQDAARFDLLMSMGHKRRDVEQSVKGQLFDDIYCTYMLL 407
            :|.|||||:|: |.:.|:|:.|...:..|..|.::::.||:.|.::::::..|.::::..||:||
  Rat   304 IMKDKWINIGY-EGEELKPYTEPEEDFGDTKRIEVMVGMGYTREEIKEALTNQKYNEVTATYLLL 367

  Fly   408 GVAKPRSSNRSTKPEAIPTVDLTTPAVSSPLPNITTPTVTIAHVTLALDKNPPIHSSS------- 465
            |.......:|..     |.:.|......|...|.|:.:...:|     :|.....||:       
  Rat   368 GRKTEEGGDRGA-----PGLALARVRAPSDTTNGTSSSKGSSH-----NKGQRTSSSTYHRQRRH 422

  Fly   466 -----ASGRPIAPRLANAPNTPTSTPPTGPPAKPTRRTPARTPARKATNHTSGQG-RPEPSSLP- 523
                 .|..|:.|:     .:||||       ..|.....|.|.|||:...:|.| |..|.|.| 
  Rat   423 SDFCGPSPAPLHPK-----RSPTST-------GDTELKEERLPGRKASCSAAGSGSRGLPPSSPM 475

  Fly   524 ----HTPQSKRASANMDVKPTLLSAQRQLAQTQKLANTPP-----RFQYPVAQTPNQAQGSSRRP 579
                |.|.....            .:|:...|....|.||     |..|...:.|    ||.|:.
  Rat   476 VSSAHNPNKAEI------------PERRKDSTSTPNNLPPSMMTRRNTYVCTERP----GSERQS 524

  Fly   580 TTLYEKAEPAVTPLLVPKSPAMGARLLERIPGGGAVEKTSDKPFTRQNVARATFHFGQARSGKRG 644
            .....|...:.|..:.|.||:..:    ..|..|...:     ..|.:..|:|||.||.|..:.|
  Rat   525 LLPNGKENSSGTSRVPPASPSSHS----LAPPSGERSR-----LARGSTIRSTFHGGQVRDRRAG 580

  Fly   645 GGSGNGA-GGEEDS----YQTPPLSADDTKPASRVGFFSKLTARFGRRV 688
            ||||.|. .|...|    ::..||.:...:|.:.:  |:|||::..|||
  Rat   581 GGSGGGVQNGPPASPTLAHEAAPLPSGRPRPTTNL--FTKLTSKLTRRV 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KP78aNP_650066.1 Protein Kinases, catalytic domain 98..349 CDD:473864 184/250 (74%)
UBA_MARK_Par1 370..408 CDD:270522 9/37 (24%)
Mark4NP_001178000.1 STKc_MARK 58..310 CDD:270974 184/251 (73%)
UBA_MARK3_4 328..370 CDD:270590 11/41 (27%)
MARK4_C 654..752 CDD:213382
Blue background indicates that the domain is not in the aligned region.

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