DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment KP78b and Smok2a

DIOPT Version :9

Sequence 1:NP_001163587.1 Gene:KP78b / 41361 FlyBaseID:FBgn0026063 Length:604 Species:Drosophila melanogaster
Sequence 2:NP_001178548.2 Gene:Smok2a / 292316 RGDID:1565233 Length:501 Species:Rattus norvegicus


Alignment Length:536 Identity:158/536 - (29%)
Similarity:254/536 - (47%) Gaps:128/536 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 FGSSGGRSSPKFQSYVNGNG-----YGVYKIIKTLGKGNFAKVKLAIHLPTGREVAIKLIDKTAL 99
            |||.  |.|.:.:|  .|:.     ...|.::.|:|.|..|.||||:|..||..||:|::     
  Rat     3 FGSK--RESERLRS--QGSSCTESFCSQYLVLNTIGHGFHAAVKLAVHRLTGTPVAVKML----- 58

  Fly   100 NTIAR----QKLYREVNIMKKLNHPNIVRLLQVIESERTLYLVMEYVSGGELFNYLVKNGRMRER 160
              :.|    |::..||.||.::||||||.|:|||::|:..||:||...|.:|::::.:.|.::|.
  Rat    59 --LKRQQWCQQVTSEVEIMMRINHPNIVSLIQVIDTEKITYLIMELAKGNQLYSHIKEAGHLQED 121

  Fly   161 DARVLFRQLVSAIEYCHSKSIVHRDLKAENLLLDQQMKLKIADFGFSTTFEPKAPLETFCGSPPY 225
            :||.:||||:||:.|||.:.|:|||||.:|||:|.:.::||.|||.:|...|...|.|..|:..:
  Rat   122 EARGIFRQLLSAVGYCHEEGIIHRDLKPDNLLVDTKGRIKIIDFGSATQVRPGQKLRTPYGTYAF 186

  Fly   226 AAPELFRGKKYSGPEVDSWSLGVVLYTLVSGSLPFDGTNLKELRDRVLRGKYRVPYYVSIECESL 290
            :||||..||.|.||:||.|:|||:||.:..|.:||:..::..||.:::.|.|.||..:|.|.:.|
  Rat   187 SAPELLLGKFYEGPKVDVWALGVILYYMTVGKVPFEAASIPLLRRQIVLGTYVVPPGLSEELQDL 251

  Fly   291 IRKFLVLNPTQRTSLSAVMADRWINM---GYEQG-NGLRPFQEKPMDLHDVNRLSLLSNMGHKPR 351
            :...|.:|..||.::..::...|:.:   |:.|. ..|.|.:..|..|.      .:.::|.:.:
  Rat   252 LSLLLKVNSQQRPTIPDLLTHPWLKIDSEGFPQPCKELIPLRPDPAILR------AMQDIGFEAQ 310

  Fly   352 DVEQSLKNQKFDDIYCTYMLLDV------------------------------------AKPR-S 379
            :|:.||..:||:.....|.||:.                                    ::|| .
  Rat   311 EVKDSLDQKKFNQSMACYYLLEKQALQECDNPTRPHPCMTPFPTLDYPATSVRGLRSRGSEPRWL 375

  Fly   380 TACSEKSGSSFRETPT-------AMPGSSRIPVPIAAPNV------TISQVTFAL---------- 421
            .:.|:..||...:||:       :.||.........||.|      :||...|:.          
  Rat   376 GSSSDSQGSDLGQTPSHRLVKRASWPGGLLCRPRQIAPTVELTHRISISDPCFSSVHSRGKKTIN 440

  Fly   422 -----DKSTPNRPAATSIRPMAPRLANALTPLPLTPPPKKY-------------ICCSASKAANP 468
                 |||:.    :..::|:|.|           |.||::             :||..     |
  Rat   441 TESTEDKSSD----SAEVKPVASR-----------PWPKRFRGWLKNIRNGLMNLCCCI-----P 485

  Fly   469 RRSEPSSIPQSAMPKK 484
            .|.:|.......:|:|
  Rat   486 SRKKPPLGHNRVVPQK 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KP78bNP_001163587.1 PKc_like 63..314 CDD:304357 104/254 (41%)
S_TKc 63..314 CDD:214567 104/254 (41%)
Smok2aNP_001178548.2 STKc_AMPK-like 26..274 CDD:270905 104/254 (41%)
UBA_MARK_Par1 294..333 CDD:270522 11/44 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0586
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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