DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5214 and LAT1

DIOPT Version :9

Sequence 1:NP_650064.1 Gene:CG5214 / 41360 FlyBaseID:FBgn0037891 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_014328.3 Gene:LAT1 / 855653 SGDID:S000005015 Length:482 Species:Saccharomyces cerevisiae


Alignment Length:489 Identity:125/489 - (25%)
Similarity:191/489 - (39%) Gaps:103/489 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 NRCQEATRLLTWQGIHTTSSLWSEQTVNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDK 116
            :|....||.|..| :...:|......:.:|..:.::.:|:: .:|.|.||..:..|.:.||||||
Yeast    12 SRSSVLTRSLRLQ-LRCYASYPEHTIIGMPALSPTMTQGNLAAWTKKEGDQLSPGEVIAEIETDK 75

  Fly   117 TTVAVPAPFSGTLTDILVKDG------------------DTVKPGQALFKIKPGAAPAKAAAPAA 163
            ..:.......|.|..|||.:|                  |.  |....||::...:.:|.:..|.
Yeast    76 AQMDFEFQEDGYLAKILVPEGTKDIPVNKPIAVYVEDKADV--PAFKDFKLEDSGSDSKTSTKAQ 138

  Fly   164 APAPAAPKAAPAPAAAPKPAPPPPAAGAPKPPPPPPPKAAPRPPPPAPVAALKPAV--------- 219
            ...|.|.|...|||...|.:.|     ..|......|:......|.|...||:..:         
Yeast   139 PAEPQAEKKQEAPAEETKTSAP-----EAKKSDVAAPQGRIFASPLAKTIALEKGISLKDVHGTG 198

  Fly   220 --------------------------AQVKVPPADGSRQILG-------TRSEQRVKMNRMRLKI 251
                                      |....|.|..|....|       |.|.:.|.::.||..|
Yeast   199 PRGRITKADIESYLEKSSKQSSQTSGAAAATPAAATSSTTAGSAPSPSSTASYEDVPISTMRSII 263

  Fly   252 AARLKDAQNTCAMLTTFNEVDMSYAMDFRKQNLDAFTK-KYGIKFGFMSIFAKASAYALQDQPVV 315
            ..||..:..........:::.:|..:..| |:|:|... ||  |.....:..||...|.:..|..
Yeast   264 GERLLQSTQGIPSYIVSSKISISKLLKLR-QSLNATANDKY--KLSINDLLVKAITVAAKRVPDA 325

  Fly   316 NAVIDGTDIVYRDY--VDISVAVATPRGLVVPVIRNVEGMNYADIEIALAGLADKARRDAITVED 378
            ||.....:.|.|.:  ||:|||||||.||:.|:::|.|....:.|...:..|..:||.:.:..|:
Yeast   326 NAYWLPNENVIRKFKNVDVSVAVATPTGLLTPIVKNCEAKGLSQISNEIKELVKRARINKLAPEE 390

  Fly   379 MDGGTFTISNGGVFGSL-MGTPIINPPQSAILGMHGI---------------FERPIAVKGEVKI 427
            ..|||..|||.|:..:: |.|.|||||||.||.:..:               |:..:.:.|    
Yeast   391 FQGGTICISNMGMNNAVNMFTSIINPPQSTILAIATVERVAVEDAAAENGFSFDNQVTITG---- 451

  Fly   428 RPMMYIALTYDHRIIDGREAVLFLRKIKAAVENP 461
                    |:|||.|||.:...|::::|..:|||
Yeast   452 --------TFDHRTIDGAKGAEFMKELKTVIENP 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5214NP_650064.1 lipoyl_domain 77..149 CDD:133458 22/90 (24%)
sucB 78..468 CDD:273565 119/464 (26%)
2-oxoacid_dh 255..462 CDD:278621 68/226 (30%)
LAT1NP_014328.3 PDHac_trf_mito 36..482 CDD:273567 119/464 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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