DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5214 and dlat

DIOPT Version :9

Sequence 1:NP_650064.1 Gene:CG5214 / 41360 FlyBaseID:FBgn0037891 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_001016320.2 Gene:dlat / 549074 XenbaseID:XB-GENE-982534 Length:628 Species:Xenopus tropicalis


Alignment Length:445 Identity:139/445 - (31%)
Similarity:198/445 - (44%) Gaps:77/445 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 VPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTLTDILVKDGDTVKP-- 142
            :|..:.::..|.: |:..|||:..:..:.:.||||||.|:....|..|.|..||:::|....|  
 Frog   200 LPALSPTMTMGTVQKWEKKVGEKLSEGDLLAEIETDKATIGFEVPEEGYLAKILIEEGTRDVPLG 264

  Fly   143 -----------------------GQALFKIKPGAAPAKAAAPAAAPAPAAPKAAPAPAAAPKPAP 184
                                   |.|..|.:| |||...|||...|..|.|..||.|:|||. ||
 Frog   265 TPLCIIVEKESDIGSFEDYKELTGVADIKPQP-AAPTPTAAPPPVPQVAVPPPAPTPSAAPS-AP 327

  Fly   185 PPPAAGAP----------------KPPPPP------------PPKAAPRP-PPPAP-VAALKPAV 219
            ......:|                |...|.            ||||||.| ..||| ||...|||
 Frog   328 KGRVFISPLARKLASEKGIDIKQVKGSGPEGRITKKDIDSFVPPKAAPVPAAAPAPTVAVPSPAV 392

  Fly   220 AQVKVPPADGSRQILGTRSEQRVKMNRMRLKIAARLKDAQNTCAMLTTFNEVDMSYAMDFRKQNL 284
            |.|   |:       |..::  |.::.:|..||.||..::.|........:::|...:..||: |
 Frog   393 AAV---PS-------GVFTD--VPISNIRRVIAQRLMQSKQTIPHYYLSIDINMGEIVQLRKE-L 444

  Fly   285 DAFTKKYGIKFGFMSIFAKASAYALQDQPVVNAVIDGTDIVYRDY--VDISVAVATPRGLVVPVI 347
            :..||...||........||||.|....|..|:  ...|.|.|.:  ||:||||:||.||:.|::
 Frog   445 NEVTKADNIKLSVNDFIIKASALACLKVPEANS--SWLDTVIRQHHVVDVSVAVSTPVGLITPIV 507

  Fly   348 RNVEGMNYADIEIALAGLADKARRDAITVEDMDGGTFTISNGGVFGSLMGTPIINPPQSAILGMH 412
            .|......|.|...:..||.:||...:...:..|||||:||.|::|....:.||||||:.||.:.
 Frog   508 FNAHTKGLATISKDVLSLATRAREGKLKPHEFQGGTFTVSNLGMYGIKNFSAIINPPQACILAVG 572

  Fly   413 GIFERPIAVKGE--VKIRPMMYIALTYDHRIIDGREAVLFLRKIKAAVENPAIIV 465
            |...|.|....|  ..:..||::.|:.|||::||.....:|.:.|..:|.|..::
 Frog   573 GSENRLIPADNEKGFDVASMMFVTLSCDHRVVDGAVGAQWLAEFKKFLEKPTTML 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5214NP_650064.1 lipoyl_domain 77..149 CDD:133458 22/93 (24%)
sucB 78..468 CDD:273565 139/445 (31%)
2-oxoacid_dh 255..462 CDD:278621 70/210 (33%)
dlatNP_001016320.2 lipoyl_domain 73..146 CDD:133458
lipoyl_domain 196..270 CDD:133458 20/69 (29%)
PDHac_trf_mito 197..628 CDD:273567 139/445 (31%)
E3_binding 332..365 CDD:280908 3/32 (9%)
2-oxoacid_dh 416..628 CDD:278621 71/215 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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