DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5214 and pdhx

DIOPT Version :9

Sequence 1:NP_650064.1 Gene:CG5214 / 41360 FlyBaseID:FBgn0037891 Length:468 Species:Drosophila melanogaster
Sequence 2:NP_956854.2 Gene:pdhx / 393532 ZFINID:ZDB-GENE-040426-1539 Length:496 Species:Danio rerio


Alignment Length:450 Identity:132/450 - (29%)
Similarity:195/450 - (43%) Gaps:92/450 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 VNVPPFADSIAEGDI-KFTCKVGDSFAADEAVMEIETDKTTVAVPAPFSGTLTDILVKDGD---- 138
            |.:|..:.::.||:| |:..|.|:..||.:|:.||||||..|.:.:...|.|..|||::|.    
Zfish    65 VQMPALSPTMEEGNIVKWLKKEGEDVAAGDALCEIETDKAVVVMESNEDGVLARILVQEGSRGVR 129

  Fly   139 -------TVKPGQALFKIK---------PGAAPAKAAAPAAAPA-PAAP---KAAPAP------- 176
                   .|..|:...:::         |.|||..||.|.|..| ||||   ::.|.|       
Zfish   130 LGTLIALMVSEGEDWKQVEIPALESVTPPTAAPPTAAPPTAGSAPPAAPALRQSVPTPLLRLSPA 194

  Fly   177 ----------------AAAPK----------------PAPPPPAAGAPKPPPPPPPKAAPRPPPP 209
                            |:.|:                .|||..||.||..||..||.|.| |.||
Zfish   195 ARHILDTHGLDPHQATASGPRGIITKEDALKLLSKASAAPPAAAAPAPSAPPAAPPAARP-PHPP 258

  Fly   210 APVAALKPAVAQVKVPPADGSRQILGTRSEQRVKMNRMRLKIAARLKDAQNTCAMLTTFNEVDMS 274
            |...|...|.......||...|:|                 ||.||..::.|..........|:|
Zfish   259 ASAPARSAAPGTFTEIPASSVRRI-----------------IAQRLTQSKTTIPHTYACIHCDIS 306

  Fly   275 YAMDFRKQNLDAFTKKYGIKFGFMSIFAKASAYALQDQPVVNA--VIDGTDIVYRDYVDISVAVA 337
            ..|..||:     ..:..||........||:|.:|::.|.||.  ..||...:  .::.||:|||
Zfish   307 GVMRVRKR-----LAEENIKVSVNDFIIKAAAVSLRELPAVNVSWSADGPQPL--GFIHISMAVA 364

  Fly   338 TPRGLVVPVIRNVEGMNYADIEIALAGLADKARRDAITVEDMDGGTFTISNGGVFGSLMGTPIIN 402
            |.|||:.|:||:.......:|......||.|||...:..|:..||:|::||.|:||....:.:||
Zfish   365 TDRGLITPIIRDAADKGLQEISSTAKALAQKARDGKLLPEEYQGGSFSVSNLGMFGISEFSAVIN 429

  Fly   403 PPQSAILGMHGI-FERPIAVKGEVKIRPMMYIALTYDHRIIDGREAVLFLRKIKAAVENP 461
            |||:.||.:.|. .|..::.:..::.:..:.:.|:.|.|::|...|..||...::.:|.|
Zfish   430 PPQACILAVGGSRTELSLSAEDTLQTQHTLTVTLSSDARLVDDELASRFLETFRSNLERP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5214NP_650064.1 lipoyl_domain 77..149 CDD:133458 26/81 (32%)
sucB 78..468 CDD:273565 131/449 (29%)
2-oxoacid_dh 255..462 CDD:278621 62/209 (30%)
pdhxNP_956854.2 PDHac_trf_mito 64..494 CDD:273567 131/449 (29%)
lipoyl_domain 64..137 CDD:133458 24/71 (34%)
E3_binding 190..222 CDD:280908 2/31 (6%)
2-oxoacid_dh 287..494 CDD:278621 62/209 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0508
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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