DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17734 and RCF1

DIOPT Version :9

Sequence 1:NP_001247043.1 Gene:CG17734 / 41359 FlyBaseID:FBgn0037890 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_013682.1 Gene:RCF1 / 854978 SGDID:S000004492 Length:159 Species:Saccharomyces cerevisiae


Alignment Length:55 Identity:13/55 - (23%)
Similarity:19/55 - (34%) Gaps:8/55 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLFDSEE----DAAQANKLSRKAKESPFMLVGEFCQFPDSESFAAVTS--HGNFW 53
            |.||..|    |.....::....|:.|.:.:|  |.........|..:  .||.|
Yeast     6 SSFDVTERDLDDMTFGERIIYHCKKQPLVPIG--CLLTTGAVILAAQNVRLGNKW 58

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17734NP_001247043.1 None
RCF1NP_013682.1 HIG_1_N 32..81 CDD:398334 7/29 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4431
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12297
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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