DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17734 and higd1a

DIOPT Version :9

Sequence 1:NP_001247043.1 Gene:CG17734 / 41359 FlyBaseID:FBgn0037890 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_001011058.1 Gene:higd1a / 496468 XenbaseID:XB-GENE-974391 Length:96 Species:Xenopus tropicalis


Alignment Length:83 Identity:27/83 - (32%)
Similarity:46/83 - (55%) Gaps:11/83 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DAAQANKLSRKAKESPFMLVGEFCQFPDSESFAAVTSHGNFWLSSQLDTHISTHIYECTLRVRRG 76
            |.:|.:||.||:|||||:.:|       ...||||.::|.|.|.|:.:|.:|.|:    :.:|..
 Frog    15 DNSQTSKLIRKSKESPFVPIG-------MAGFAAVVAYGLFKLKSRGNTKMSVHL----IHMRVA 68

  Fly    77 SRLILTLAMSLTSIWGHF 94
            ::..:..||:...|:..:
 Frog    69 AQGFVVGAMTCGVIYSMY 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17734NP_001247043.1 None
higd1aNP_001011058.1 HIG_1_N 29..80 CDD:368011 18/61 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5101
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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