DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17734 and higd1a

DIOPT Version :9

Sequence 1:NP_001247043.1 Gene:CG17734 / 41359 FlyBaseID:FBgn0037890 Length:106 Species:Drosophila melanogaster
Sequence 2:NP_956394.1 Gene:higd1a / 373084 ZFINID:ZDB-GENE-030826-15 Length:99 Species:Danio rerio


Alignment Length:94 Identity:26/94 - (27%)
Similarity:45/94 - (47%) Gaps:17/94 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSKSLFDSEEDAAQANKLSRKAKESPFMLVGEFCQFPDSESFAAVTSHGNFWLSSQLDTHISTH 65
            ||.....|:|      :||.||.|::||:..|       ...|.|:.::..|.|.|:.||.:|.|
Zfish     1 MSDIGYEDNE------SKLMRKIKQNPFVPAG-------MAGFFAIVAYRLFKLKSRGDTKMSVH 52

  Fly    66 IYECTLRVRRGSRLILTLAMSLTSIWGHF 94
            :    :.:|..::..:..||:|..|:..:
Zfish    53 L----IHMRVAAQGFVVGAMTLGVIYSMY 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17734NP_001247043.1 None
higd1aNP_956394.1 HIG_1_N 21..69 CDD:282450 14/58 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4431
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12297
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5101
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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