DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and AT5G66590

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_201460.1 Gene:AT5G66590 / 836791 AraportID:AT5G66590 Length:185 Species:Arabidopsis thaliana


Alignment Length:245 Identity:47/245 - (19%)
Similarity:76/245 - (31%) Gaps:83/245 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFTK---VLQLILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPKDVREVKIEPHHKL- 61
            ||.|.   .:.|::::|.|||.|                      ::..||.:......|...: 
plant     1 MALTHHIIFVALLVISVKAISPA----------------------AKLKPKQIVSTSPPPPPTIS 43

  Fly    62 -ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEEL----SHLALL--NVKTCESLPDKCRSTER 119
             ....|.:..|....  :.|:|..|      |.:.|    |.||..  |.|.||           
plant    44 AAAKAFTDAHNKARA--MVGVPPLV------WSQTLEAAASRLARYQRNQKKCE----------- 89

  Fly   120 FAYAGQNNALFQYSGAETEYTDAEII---KEEIENWFAERS--NASPEILASFPEELPNKAVTKF 179
              :|..|...:   ||...:....:.   ...:|.|..|:.  |...:..|:      |.....:
plant    90 --FASLNPGKY---GANQLWAKGLVAVTPSLAVETWVKEKPFYNYKSDTCAA------NHTCGVY 143

  Fly   180 TIAVAEKNTHVGCAAVRFSRD-------FYNHFVLTCNFATSNIVGQPVY 222
            ...|...:..:|||....:::       |||        ...|::||..|
plant   144 KQVVWRNSKELGCAQATCTKESTVLTICFYN--------PPGNVIGQKPY 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 31/171 (18%)
AT5G66590NP_201460.1 CAP_PR-1 46..185 CDD:349400 34/176 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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