DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and Glipr1

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_006514280.1 Gene:Glipr1 / 73690 MGIID:1920940 Length:270 Species:Mus musculus


Alignment Length:253 Identity:51/253 - (20%)
Similarity:81/253 - (32%) Gaps:90/253 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LQLILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRN 71
            :|:||..:|.::|:|                :..:|:.:...|:..   |...|..:.:.|:||:
Mouse     1 MQVILAVIVWMASSV----------------SSSSFTASTLPDITN---EDFIKECVQVHNQLRS 46

  Fly    72 NVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPD---KCRSTERFAYAGQN-----NA 128
            .|:       |.|..|..|||..:|:.:|....|:||...:   ..|....|...|:|     .:
Mouse    47 KVS-------PPARNMLYMSWDPKLAQIAKAWTKSCEFKHNPQLHSRIHPNFTALGENIWLGSLS 104

  Fly   129 LFQYSGAETEYTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCA 193
            :|..|.|             |..|:.|..:      ..|...........:|..|...:..:|||
Mouse   105 IFSVSSA-------------ISAWYEEIKH------YDFSTRKCRHVCGHYTQVVWADSYKLGCA 150

  Fly   194 AVRFSRDFYNHFVLTC----NFATSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLCY 247
                        |..|    ||...                     ||.|.:||...|
Mouse   151 ------------VQLCPNGANFICD---------------------YGPAGNYPTWPY 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 35/163 (21%)
Glipr1XP_006514280.1 CAP_GLIPR1-like 32..168 CDD:349404 38/194 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841309
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5254
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.900

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