DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and Crisp3

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_074050.1 Gene:Crisp3 / 64827 RGDID:619846 Length:246 Species:Rattus norvegicus


Alignment Length:270 Identity:56/270 - (20%)
Similarity:92/270 - (34%) Gaps:78/270 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LQLILLAVVAISSAVDYCALPTCL--------DKHVACNNKGNFSENCPKDVREVKIEPHHKLIL 63
            |.|:||.:.|:        ||..|        |:.:         ||.......|:.|     |:
  Rat     3 LMLVLLFLAAV--------LPPSLLQDTTDEWDRDL---------ENLSTTKLSVQEE-----II 45

  Fly    64 NLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKC---------RSTER 119
            |..|:||..|:       |....:.::.|    .|.|.:|   .:...::|         |:|. 
  Rat    46 NKHNQLRRTVS-------PSGSDLLRVEW----DHDAYVN---AQKWANRCIYNHSPLQHRTTT- 95

  Fly   120 FAYAGQNNALFQYSGAETEYTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVTKFTIAVA 184
             ...|:|..:..|..:.:..         |::|:.|    |.:.:..|..:.....|..:|..|.
  Rat    96 -LKCGENLFMANYPASWSSV---------IQDWYDE----SLDFVFGFGPKKVGVKVGHYTQVVW 146

  Fly   185 EKNTHVGCAAVRFSRDFYNHFVLTCNFAT-SNIVGQ--PVYTPGEKATTGCKNRYGAAYD--YPN 244
            .....|.|...........:|.: |::.. .|.||:  ..||.||.    |.:..|...|  ..|
  Rat   147 NSTFLVACGVAECPDQPLKYFYV-CHYCPGGNYVGRLYSPYTEGEP----CDSCPGNCEDGLCTN 206

  Fly   245 LCYAKEIYDN 254
            .|..::.|.|
  Rat   207 SCEYEDNYSN 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 29/160 (18%)
Crisp3NP_074050.1 SCP_CRISP 39..174 CDD:240183 31/169 (18%)
Crisp 192..246 CDD:285731 7/25 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344811
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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