DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and crisp1.3

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001008204.1 Gene:crisp1.3 / 493566 XenbaseID:XB-GENE-951048 Length:240 Species:Xenopus tropicalis


Alignment Length:209 Identity:45/209 - (21%)
Similarity:79/209 - (37%) Gaps:43/209 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 KLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCES--LPDKCRSTERFAY 122
            ::|:|..|..|.|.:       |.|..|.||.|.::.:..|.....||..  .|...|:...|. 
 Frog    36 QIIINAHNNYRRNAS-------PSARNMLKMVWNKDAAINAASWAATCSESHSPSDKRTIPGFG- 92

  Fly   123 AGQNNALFQYSGAETEYTDAEIIKEEIENWFAERSN----ASPEILASFPEELPNKAVTKFTIAV 183
            .|:|..:..|..:         .:|.::.|::|.::    ..|        :.|......:|..:
 Frog    93 CGENLYMASYPAS---------WEEAVKGWYSEYNDFQYGVGP--------KSPGLVTGHYTQVM 140

  Fly   184 AEKNTHVGCAAVRFSRDFYNHFVLTCNFATSNIVGQPVYTP---GEKAT---TGCKNRYGAAYDY 242
            ...:..|||:.....:..|.:|.: |.:..:..:...:.||   |.|..   |.|.|  |...:|
 Frog   141 WYNSYMVGCSVSYCPKSPYKYFYV-CQYCPAGNLDSTMSTPYKTGPKCADCPTACDN--GLCTNY 202

  Fly   243 PNLCYAKEIYDNEK 256
               |..:::|.|.|
 Frog   203 ---CPYQDLYSNCK 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 32/157 (20%)
crisp1.3NP_001008204.1 CAP_CRISP 33..170 CDD:349402 32/159 (20%)
Crisp 187..240 CDD:369954 9/32 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.040

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