DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and CG11977

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_649855.3 Gene:CG11977 / 41076 FlyBaseID:FBgn0037650 Length:274 Species:Drosophila melanogaster


Alignment Length:205 Identity:48/205 - (23%)
Similarity:83/205 - (40%) Gaps:13/205 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 DYCALPTC--LDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKA 84
            |||....|  ..||:.|..| .:|..|.::...|::..:...|:...|..|..:..| :..||:|
  Fly    43 DYCNADICPANKKHITCGFK-FWSTKCGRNHEGVRMSDYRYDIVRNVNNFRRKLEWG-LGNLPRA 105

  Fly    85 VRMAKMSWCEELSHLALLNVKTC-ESLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAEIIKEE 148
            |:...:.|.:|||.:|:.....| :.....|.:|..:...|:::...:.......:.    :...
  Fly   106 VKFKNIKWDDELSVMAMRVSNQCLQHTFSPCVNTFLYKDVGESSDFVKVQNTSKGFN----VISF 166

  Fly   149 IENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNFAT 213
            :..||.......|..:.:||...|...:..|...:.|||..:||..|:..:..:    |||.|..
  Fly   167 LNMWFEYHKMMKPSYVNNFPNIAPQDRLIIFANLIYEKNKKMGCGMVKSGQGRF----LTCLFDK 227

  Fly   214 SNIVGQPVYT 223
            .....|.:||
  Fly   228 KIKPNQKLYT 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 33/152 (22%)
CG11977NP_649855.3 SCP_euk 81..226 CDD:240180 33/153 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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