DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and glipr1b

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_005159058.1 Gene:glipr1b / 393547 ZFINID:ZDB-GENE-040426-1459 Length:255 Species:Danio rerio


Alignment Length:258 Identity:46/258 - (17%)
Similarity:82/258 - (31%) Gaps:73/258 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPK--DVREVKIEPHHKLILNLFNELRN 71
            |:.::||...|......||...:.        .|...|.|  :....::.|              
Zfish     8 LLRISVVLYGSCSVLALLPGITEP--------EFIRRCVKAHNTHRARVSP-------------- 50

  Fly    72 NVAGGKIEGLPKAVR--MAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQYSG 134
            ..||.:     ..||  ....||.:||:       |........|:.:...:.....:.||.:.|
Zfish    51 PAAGAR-----SMVRQVFGMQSWDKELA-------KGARDRARHCKGSHYPSLGHFGHPLFGWMG 103

  Fly   135 AETEYTDAEIIKEEIEN----W-----FAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHV 190
             |..:..:......:||    |     ::.::|....:...:.:.:.:   |.|         .:
Zfish   104 -ENIWLGSPFSAFSVENAVHRWSKEGAYSVKNNNCSRLCGHYAQLMWS---TSF---------KM 155

  Fly   191 GCAAVRFSR---DFYNH---FVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLC 246
            |||....|:   :|..|   .:..||:. |..:.|...|.  ....:||    |:.....|:|
Zfish   156 GCAVNVCSKGIENFSTHPESTIFVCNYGDTGQVHGVTPYM--AMGCSGC----GSEICRDNVC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 28/168 (17%)
glipr1bXP_005159058.1 SCP 32..185 CDD:294090 32/191 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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