DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and scl-20

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_507655.1 Gene:scl-20 / 191309 WormBaseID:WBGene00013972 Length:212 Species:Caenorhabditis elegans


Alignment Length:262 Identity:70/262 - (26%)
Similarity:101/262 - (38%) Gaps:65/262 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAFTKVLQLILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNL 65
            |.|..:|.||               .|.||     |:.:..     |...||         |::.
 Worm     1 MRFLPILFLI---------------FPNCL-----CDFRFG-----PTAQRE---------IVDF 31

  Fly    66 FNELRNNVAGGK--IEGLPK--AVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQN 126
            .|.||:.:|.|.  ::|:||  |..|.||.|...|:.:|..|..||.||....:...|..|....
 Worm    32 HNSLRSQLANGDYVVDGVPKPPAKDMMKMKWDPILAGMAKNNAATCPSLFTDSKMLGRNYYHRLA 96

  Fly   127 NALFQYSGAETEYTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVG 191
            |..   ||:..:|  |....::.|..|.||...:.| ...|.:   ::.:|..|..|.....|||
 Worm    97 NVT---SGSLDKY--ALFAVKKWERQFQERGWKNQE-FRMFGD---HRLLTSATQMVWATTRHVG 152

  Fly   192 CA-----AVRFSRDFYNHFVLTCNF-ATSNIVGQPVYTPGE-----KATTGCKNRYGAAYDYPNL 245
            |.     |.:....:.|..|:.|.: :..||.|.|:|..|.     .|:|.|:.|.|       |
 Worm   153 CGVNICDAEKNLFGYRNKVVVICEYQSKGNIHGLPIYKEGPTCSACPASTKCERRSG-------L 210

  Fly   246 CY 247
            |:
 Worm   211 CF 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 45/161 (28%)
scl-20NP_507655.1 SCP 23..177 CDD:214553 47/171 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.000

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