DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and scl-21

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_507793.1 Gene:scl-21 / 189870 WormBaseID:WBGene00012816 Length:198 Species:Caenorhabditis elegans


Alignment Length:223 Identity:52/223 - (23%)
Similarity:73/223 - (32%) Gaps:65/223 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CLDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNVAGGK-------IEGLPKAVR 86
            ||   .|.:....||.:..|:            |:...|:||:.||..:       :|.||.|..
 Worm     8 CL---AAVSVHAQFSASAQKE------------IVTYINDLRSLVASRRFHLDSRDVETLPPASD 57

  Fly    87 MAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAEIIKEEIEN 151
            |.||:|...|:..|....|||                     ......:.....|..|:   ..|
 Worm    58 MLKMTWNSTLAVAAQKLAKTC---------------------FIAVESSSPGIADKRIV---AAN 98

  Fly   152 WFAERSNASPEILASFPEELPNKAVTKFTIAVA---EKNTHVGCAAVRFS--------RDFYNHF 205
            ......||......|..:|...|:.....|.:.   .|::.|||.   ||        |.:|.  
 Worm    99 VVTVAKNALGHWKHSLNKEWNLKSYNSNYIGIQLIWAKSSSVGCG---FSPCEIDSQGRRWYK-- 158

  Fly   206 VLTCNF-ATSNIVGQPVYTPGEKATTGC 232
             :.|:| ....|..:|||..| ||...|
 Worm   159 -VVCSFEKKGGITREPVYKKG-KACEAC 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 38/170 (22%)
scl-21NP_507793.1 CAP_euk 23..163 CDD:349399 38/181 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.870

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