DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and scl-24

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_507429.1 Gene:scl-24 / 184188 WormBaseID:WBGene00008575 Length:212 Species:Caenorhabditis elegans


Alignment Length:277 Identity:56/277 - (20%)
Similarity:92/277 - (33%) Gaps:105/277 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LQLILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPKDVREVKIEPHHKL-------ILN 64
            |.::|||:.|.:.|          ::|                     ..|.|:.       |:.
 Worm     3 LIILLLALTAAAHA----------ERH---------------------FNPQHQWNAEAIDNIVF 36

  Fly    65 LFNELRNNVAGGKIE--GLPKAVRMAKMSWCEELSHLALLNVKT----CE-----SLPDKCRSTE 118
            :.|:|||..:.|..|  .:.|:..|..:||.|.|    :..|:.    ||     :||.|     
 Worm    37 IHNKLRNAASHGLWERYSISKSSNMQLLSWNESL----VAEVENEKYYCEPADNKNLPIK----- 92

  Fly   119 RFAYAGQNNALFQYSGAETEYTDAE------IIKEEIENWFAERSNASPEILASFPEELPNKAVT 177
                .|.|  ::||.  ...|.|.:      .|.::..|.......|:...|...          
 Worm    93 ----LGDN--IYQYD--VNTYDDIDGVGAMGSINKDTHNALKSEEKATKNRLRQM---------- 139

  Fly   178 KFTIAVAEKNTHVGCAAVRFSRD-------FYNHFVLTCNFA--TSNIVGQPVYTPGEKATTGCK 233
                 :..|:..:||  :..|.|       .||..::.|.::  ..|| .:.::..||.. :.|.
 Worm   140 -----LYSKSKSIGC--IYESCDKIDSKGINYNTRLVICKYSPPLENI-DEQLFDKGEPC-SNCP 195

  Fly   234 NRYGAAYDYPN----LC 246
            :......| ||    ||
 Worm   196 SGTSCGTD-PNEMMKLC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 37/182 (20%)
scl-24NP_507429.1 CAP_euk 31..174 CDD:349399 37/176 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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