DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment scpr-A and scl-26

DIOPT Version :9

Sequence 1:	NP_650062.1	Gene:	scpr-A / 41358	FlyBaseID:	FBgn0037889	Length:	264	Species:	Drosophila melanogaster
Sequence 2:	NP_504963.1	Gene:	scl-26 / 183662	WormBaseID:	WBGene00016821	Length:	208	Species:	Caenorhabditis elegans

Alignment Length:	229	Identity:	50/229 - (21%)
Similarity:	84/229 - (36%)	Gaps:	55/229 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly    40 GNFSENCPKDVREVKIEPHHKLILNLFNELRNNVAGG--KIEGLPKAVRMAKMSWCEELSHLALL 102
            |:|:..  .:..|..||.    ::.:.|:|||:.:.|  ....:.|:..|.|:.|...|...|..
Worm    14 GSFAST--HEWNETAIEG----LVFVHNKLRNDASQGLWARHNISKSTDMQKLFWNNSLVAEAKH 72

  Fly   103 NVKTCESLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAE------IIKEEIENWFAERSNASP 161
            .:..|:.|      .:|....|:|  ::||.  .|.|.|.:      .|.::..:..:.:..|:.
Worm    73 EMYDCDQL------EKRELTLGEN--IYQYD--VTTYDDVDGQQGEAAINKDSHDALSSKDQAAQ 127

  Fly   162 ----EILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSR-----DFYNHFVLTCNF--ATSN 215
                :||.|                   |:..:||......|     ..||...:.|.:  |..|
Worm   128 YRLRQILYS-------------------KSNSIGCIYESCDRIDDEGTNYNTRFIICKYSPALKN 173

  Fly   216 IVGQPVYTPGEKATTGCKNRYGAAYDYPNLCYAK 249
            |..| :|..||:|.:.|.:..........||..|
Worm   174 IDDQ-LYEEGEEACSNCPSGTSCTDPMMKLCEKK 206

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scpr-A	NP_650062.1	SCP_euk	60..212	CDD:240180	33/170 (19%)
scl-26	NP_504963.1	CAP_euk	30..168	CDD:349399	33/166 (20%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10334
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.920