DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and scl-7

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_502509.1 Gene:scl-7 / 183344 WormBaseID:WBGene00008029 Length:209 Species:Caenorhabditis elegans


Alignment Length:231 Identity:49/231 - (21%)
Similarity:77/231 - (33%) Gaps:57/231 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CLDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNVAGGK--IEGLPK--AVRMAK 89
            |:..|...:..|..|                  ::|..|.:|:::|.|:  .:|..|  |..|.|
 Worm    11 CVGAHAQFSEGGKQS------------------MVNAHNAVRSSIAKGEYVAKGTKKDSATNMLK 57

  Fly    90 MSWCEELSHLALLNVKTC--ESLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAEIIKEEIENW 152
            |.|...|:..|......|  :..|||       :|.  .|..:.||.:.....| :.::..::.|
 Worm    58 MKWDNSLAQSAQNYANGCPMQHSPDK-------SYG--ENLFWAYSSSPITDLD-KYVQSAVDTW 112

  Fly   153 FAE------RSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSRDFYN----HFVL 207
            .:|      .||       .|...|.|..:...|.........|||.|.....|...    ...:
 Worm   113 VSEFQMFGWNSN-------KFTTALWNTGIGHATQVAWSATGQVGCGAKNCGADSVRVGSYKATI 170

  Fly   208 TCNF-ATSNIVGQPVYTPGEK-----ATTGCKNRYG 237
            .|.: ...|.:.:.:|..|.|     |.|.|:...|
 Worm   171 VCQYKVPGNYLFKNIYNSGAKCSACPAGTSCEQSSG 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 37/168 (22%)
scl-7NP_502509.1 SCP 22..174 CDD:214553 39/186 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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