DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-A and scl-13

DIOPT Version :10

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_504055.1 Gene:scl-13 / 178798 WormBaseID:WBGene00019179 Length:208 Species:Caenorhabditis elegans


Alignment Length:218 Identity:44/218 - (20%)
Similarity:71/218 - (32%) Gaps:69/218 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ILNLFNELRNNVAGGKIEGL----PKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAY 122
            |::..|:||:.:|.|.....    |.|..|.|:.|.|.::..|   .:..|..||          
 Worm    26 IVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVWDETVAAAA---QEYAEGCPD---------- 77

  Fly   123 AGQNNALFQYSGAETEYTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVTKF-------- 179
                    .:||  |.|.         ||.:...|:::|..|..|.....|...::|        
 Worm    78 --------DHSG--TSYG---------ENLYWSWSSSAPSSLDKFGVAASNSWESEFQKYGWTST 123

  Fly   180 ---------------TIAVAEKNTHVGCAAVRFSRD-----FYNHFVLTCNF-ATSNIVGQPVYT 223
                           .:|.|| .:.:||......:|     .|. ..:.|.: :..|::...:|.
 Worm   124 FLDEAGFATGIGHATQMAWAE-TSKIGCGIKNCGKDANKKNMYK-VAVVCQYDSAGNMMDSDIYQ 186

  Fly   224 PGEKATTGCKNRYGAAYDYPNLC 246
            .|| ..:.|........| ..||
 Worm   187 QGE-TCSACSEDASCEQD-SGLC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 CAP_euk 59..212 CDD:349399 36/182 (20%)
scl-13NP_504055.1 SCP 21..174 CDD:214553 36/181 (20%)

Return to query results.
Submit another query.