DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and scl-3

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_502504.1 Gene:scl-3 / 178252 WormBaseID:WBGene00009896 Length:211 Species:Caenorhabditis elegans


Alignment Length:201 Identity:50/201 - (24%)
Similarity:78/201 - (38%) Gaps:33/201 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EPHHKLILNLFNELRNNVAGGK--IEGLPKAV--RMAKMSWCEELSHLALLNVKTCESLPDKCRS 116
            |...:.|::|.|:||.::|.|.  .:|..||.  .:.||.|...|:..|.....||.      |.
 Worm    22 ESTQQFIVDLHNKLRTSIAKGTYVAKGTTKAAGSNLLKMKWDTTLATAAQTFANTCP------RG 80

  Fly   117 TERFAYAGQNN----ALFQYSGAETEYTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVT 177
            ....|..|:|.    :...:||.:.....|.:..|:....:...:|       :|.:.|.|..:.
 Worm    81 HSNAAGVGENLYWRWSSLPFSGMDIYGGAASVAWEQEFQQYGWTTN-------TFTQALANTGIG 138

  Fly   178 KFTIAVAEKNTH-VGCAAVRFSRD----FYNHFVLTCNF-ATSNIVGQPVYTPGEKAT-----TG 231
            ..| .:|..||. :||.......|    .||..|:.|.: |..|.:||.:|..|...:     |.
 Worm   139 HAT-QMAWANTGLIGCGVKNCGPDPELNNYNRAVVVCQYKAQGNYLGQDIYKSGTTCSACPTGTT 202

  Fly   232 CKNRYG 237
            |:...|
 Worm   203 CEAATG 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 40/165 (24%)
scl-3NP_502504.1 SCP 23..176 CDD:214553 40/166 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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