DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and scl-2

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_502503.1 Gene:scl-2 / 178251 WormBaseID:WBGene00009895 Length:207 Species:Caenorhabditis elegans


Alignment Length:250 Identity:49/250 - (19%)
Similarity:81/250 - (32%) Gaps:70/250 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LILLAVVAISSAVDYCALPTCLDKHVACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNV 73
            |:|:..:|:..:.|:                |:..:|.               |:|..|.||:.:
 Worm     4 LLLVVALAVGCSADF----------------GSSGQNG---------------IINAHNTLRSKI 37

  Fly    74 AGGK--IEGLPKA--VRMAKMSWCEELSHLALLNVKTCES--LPDKCRSTERFAY--AGQNNALF 130
            |.|.  .:|..|:  ..:.||.|...::..|......|.:  ..|.......:.|  :|....|.
 Worm    38 AKGTYVAKGTQKSPGTNLLKMKWDSAVAASAQNYANGCPTGHSGDAGLGENLYWYWTSGSLGDLN 102

  Fly   131 QYSGA-----ETEYTDAEIIKEEIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHV 190
            ||..|     |.|:.|           :..:||.       ...:|.|..:...|.....|:..:
 Worm   103 QYGSAASASWEKEFQD-----------YGWKSNL-------MTIDLFNTGIGHATQMAWAKSNLI 149

  Fly   191 GCAAVRFSRDF--YNHFVLTCNF-ATSNIVGQPVYTPGEKAT-----TGCKNRYG 237
            ||......||.  .|...:.|.: ...|.:.|.:|..|...:     |.|:...|
 Worm   150 GCGVKDCGRDSNGLNKVTVVCQYKPQGNFINQYIYVSGATCSGCPSGTSCETSTG 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 36/167 (22%)
scl-2NP_502503.1 SCP 21..174 CDD:214553 37/185 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6223
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.100

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