DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and CG42717

DIOPT Version :9

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_001189115.1 Gene:CG42717 / 10178897 FlyBaseID:FBgn0261634 Length:96 Species:Drosophila melanogaster


Alignment Length:126 Identity:24/126 - (19%)
Similarity:42/126 - (33%) Gaps:57/126 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LILLAVVAISSAVDYCALPTCLDKHVA----CNNKGNFSENCPKDVREVKIEPHHKLILNLFNEL 69
            |||:|||          :..|:..:|.    |..|       |||                 ::.
  Fly     6 LILIAVV----------MTVCIFANVTGVTRCKGK-------PKD-----------------SKC 36

  Fly    70 RNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAY---AGQNN 127
            ..|:.||.          .:.|.|::.::..:.:..|      :.::..:|.|   .|.||
  Fly    37 AGNLDGGN----------NRKSKCKKSANKNMWHYNT------RTKNCTQFNYLGCGGNNN 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 SCP_euk 60..212 CDD:240180 11/71 (15%)
CG42717NP_001189115.1 KU <53..93 CDD:294074 6/35 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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