DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and crispld2

DIOPT Version :10

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:210 Identity:52/210 - (24%)
Similarity:76/210 - (36%) Gaps:42/210 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCR----STERFAY 122
            ||.|.|:||..|       .|.|..|..|.|.:||.       ::..|..::|:    ..:....
Zfish    64 ILKLHNKLRGEV-------YPTASNMEYMIWDDELE-------RSATSWAEQCQWEHGPQDLLMS 114

  Fly   123 AGQNNALFQYSGAETEYTDAEIIKEEIENWFAE-RSNASP---EILASFPEELPNKAVTKFTIAV 183
            .|||.|:.........|        .::.|:.| :....|   |.....||.......|.:|..|
Zfish   115 IGQNLAVHWGRYRSPAY--------HVQAWYDEVKDYTYPYPHECNPWCPERCSGPMCTHYTQLV 171

  Fly   184 AEKNTHVGCAAVRFSR------DFYNHFVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYD 241
            ......||||.....|      .:.|...|.||:: ..|.:|:..|..| :..:.|...||... 
Zfish   172 WATTNRVGCAVHVCPRMNVWGEIWENAVYLVCNYSPKGNWIGEAPYQHG-RPCSQCPPSYGGVC- 234

  Fly   242 YPNLCYAKEIYDNEK 256
            ..||||.:   |:|:
Zfish   235 RDNLCYKR---DSER 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 CAP_euk 59..212 CDD:349399 39/163 (24%)
crispld2XP_003199065.1 CAP_CRISPLD2 61..206 CDD:349410 39/163 (24%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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